Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_1289 |
Symbol | |
ID | 4432325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 1197484 |
End bp | 1198680 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 639667029 |
Product | major facilitator superfamily permease |
Protein accession | YP_809239 |
Protein GI | 116512023 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000157601 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAAAT CATCAACTTC TTTCCAGAAT GTTCGACTAA AAGTTGCTAT TTTATGTATA TCCTTAACAA TCCAAACAGC AGGCGCTGTT GCTGCTGCTG TACCGGCGAT GATTGATTCC TTTGCCAATC GAAGTACAAC CGAAATTCAA TCACTGTTAA CAATCCCCTC TTTCTCTATT ATGTTATTCA TAATTCTAAG CTCTGGAATT ATTAAATACA TCGGAAAACG TAATACAGTT CTTATAGGAT TGACCATAGC TCTTTTGGGC GGACTATTAC CTGCTTTTAC TTCCAATTTT TATTTAATTT TATTAGGTCG TTTCTTATTC GGTGCTGGTA CTGGATTATA CAATTCATTA ACGATTTCTT TAATCGGATA TTGTTTTGAA GGAGATGAGC AACAAAATTT AATTGGATTA CAATCAGCTA CTGCTGCCTT AGGAAACAGC GTCGCAACTT TTATTGCAGG TCTATTATTA TCAGTTAATT GGCATAGTAG TTTCTTAGTT TATTTAGCAA TAATTCCTAT GATTATTATT TTTTCGCTAG GATACACAAA AAGAATTGAG AAAGAAACGA GTGTTGAAGT TAAAAACGAT ACCGTCGCAC ATGTAAATAA AAAATTATCC CCTGCTGTTC TTTTAGGTAT TTTCACGTTA TTTTTCTTCT TCGTGTCTGT AATCGTCATG CTAACTTCAT CAGCACTTGC AATTCAACAA TTAGGACTGG CTCACTCTGA ACTTCTGTCT CTTGCTTTAG CAGTAGCCGG TATTTTAGGA AGTATCAGCT TCATCTTTTA TGGACAAATT CATAAGTTAT TTAAAAATTT CACACCTGTT TTAGCATGTG TTTTAGGATT CATAGGGTAT TTAATACTAC TTGCGGCTAC CAATATGCTT GTATTCTTTA TTGGTTTAGT TTTTGTCTCC ATTTCCATGA TAGTTATTCC TTATGTATAC GGTCTAATTT TATCTAGTGT GACATCTTCC GCCAAAAATA TTGTTATTTC ACTAGCTATG ATTGCTTGTA ACTTAGGATC CTTCTTTTCG CCTTTTATAA TCAGTTTTTT AGCAAAAATA TTTGGAGCTT CTGACGCTTT ATCACAAATA AAATATGCAG CTTTCATTTT TGTCGTAATA GCTTTGATTT TCACATTCTC AGCTCTGACC TCTAAAAATA AAGGTCGTGA ACAATAA
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Protein sequence | MLKSSTSFQN VRLKVAILCI SLTIQTAGAV AAAVPAMIDS FANRSTTEIQ SLLTIPSFSI MLFIILSSGI IKYIGKRNTV LIGLTIALLG GLLPAFTSNF YLILLGRFLF GAGTGLYNSL TISLIGYCFE GDEQQNLIGL QSATAALGNS VATFIAGLLL SVNWHSSFLV YLAIIPMIII FSLGYTKRIE KETSVEVKND TVAHVNKKLS PAVLLGIFTL FFFFVSVIVM LTSSALAIQQ LGLAHSELLS LALAVAGILG SISFIFYGQI HKLFKNFTPV LACVLGFIGY LILLAATNML VFFIGLVFVS ISMIVIPYVY GLILSSVTSS AKNIVISLAM IACNLGSFFS PFIISFLAKI FGASDALSQI KYAAFIFVVI ALIFTFSALT SKNKGREQ
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