Gene LACR_1289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_1289 
Symbol 
ID4432325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp1197484 
End bp1198680 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content33% 
IMG OID639667029 
Productmajor facilitator superfamily permease 
Protein accessionYP_809239 
Protein GI116512023 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000157601 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAAT CATCAACTTC TTTCCAGAAT GTTCGACTAA AAGTTGCTAT TTTATGTATA 
TCCTTAACAA TCCAAACAGC AGGCGCTGTT GCTGCTGCTG TACCGGCGAT GATTGATTCC
TTTGCCAATC GAAGTACAAC CGAAATTCAA TCACTGTTAA CAATCCCCTC TTTCTCTATT
ATGTTATTCA TAATTCTAAG CTCTGGAATT ATTAAATACA TCGGAAAACG TAATACAGTT
CTTATAGGAT TGACCATAGC TCTTTTGGGC GGACTATTAC CTGCTTTTAC TTCCAATTTT
TATTTAATTT TATTAGGTCG TTTCTTATTC GGTGCTGGTA CTGGATTATA CAATTCATTA
ACGATTTCTT TAATCGGATA TTGTTTTGAA GGAGATGAGC AACAAAATTT AATTGGATTA
CAATCAGCTA CTGCTGCCTT AGGAAACAGC GTCGCAACTT TTATTGCAGG TCTATTATTA
TCAGTTAATT GGCATAGTAG TTTCTTAGTT TATTTAGCAA TAATTCCTAT GATTATTATT
TTTTCGCTAG GATACACAAA AAGAATTGAG AAAGAAACGA GTGTTGAAGT TAAAAACGAT
ACCGTCGCAC ATGTAAATAA AAAATTATCC CCTGCTGTTC TTTTAGGTAT TTTCACGTTA
TTTTTCTTCT TCGTGTCTGT AATCGTCATG CTAACTTCAT CAGCACTTGC AATTCAACAA
TTAGGACTGG CTCACTCTGA ACTTCTGTCT CTTGCTTTAG CAGTAGCCGG TATTTTAGGA
AGTATCAGCT TCATCTTTTA TGGACAAATT CATAAGTTAT TTAAAAATTT CACACCTGTT
TTAGCATGTG TTTTAGGATT CATAGGGTAT TTAATACTAC TTGCGGCTAC CAATATGCTT
GTATTCTTTA TTGGTTTAGT TTTTGTCTCC ATTTCCATGA TAGTTATTCC TTATGTATAC
GGTCTAATTT TATCTAGTGT GACATCTTCC GCCAAAAATA TTGTTATTTC ACTAGCTATG
ATTGCTTGTA ACTTAGGATC CTTCTTTTCG CCTTTTATAA TCAGTTTTTT AGCAAAAATA
TTTGGAGCTT CTGACGCTTT ATCACAAATA AAATATGCAG CTTTCATTTT TGTCGTAATA
GCTTTGATTT TCACATTCTC AGCTCTGACC TCTAAAAATA AAGGTCGTGA ACAATAA
 
Protein sequence
MLKSSTSFQN VRLKVAILCI SLTIQTAGAV AAAVPAMIDS FANRSTTEIQ SLLTIPSFSI 
MLFIILSSGI IKYIGKRNTV LIGLTIALLG GLLPAFTSNF YLILLGRFLF GAGTGLYNSL
TISLIGYCFE GDEQQNLIGL QSATAALGNS VATFIAGLLL SVNWHSSFLV YLAIIPMIII
FSLGYTKRIE KETSVEVKND TVAHVNKKLS PAVLLGIFTL FFFFVSVIVM LTSSALAIQQ
LGLAHSELLS LALAVAGILG SISFIFYGQI HKLFKNFTPV LACVLGFIGY LILLAATNML
VFFIGLVFVS ISMIVIPYVY GLILSSVTSS AKNIVISLAM IACNLGSFFS PFIISFLAKI
FGASDALSQI KYAAFIFVVI ALIFTFSALT SKNKGREQ