| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_1288 |
|---|
| Symbol | |
|---|
| ID | 4432324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | - |
|---|
| Start bp | 1196585 |
|---|
| End bp | 1197484 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 639667028 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_809238 |
|---|
| Protein GI | 116512022 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0436335 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAG AACCCGAATG GCTAAAAAAT ATTATCAGCT TACCCGAAAT AAATATGAAT
ATGAAATTTT TTGGAGGGCA CCAACAAAGT GTTCCATTAG GCTGGAAAAT TGAACGTGAG
GCTCATTTTG CTTTCGAGAT TATGATTATA CTTGATGGTG TTCAACAGAC TAAATTTGAT
GGATGTTCAT TTAATTGTTA TCAAGATGAT ATCATACTCA TCCCACCCGG AATGCCACAT
GAAAACTCTT GTATTTCGCC TACTGGTATG CATTATTTTT GTGTCCATTT TGATATTGAT
GATCCAGAGA TTCAATTAAA TATACTTATG CTTTGCTCAG TAAAATTAAA TAAAAATAAT
GATGCTTTTA CAAAAATAAA ATCAGTTCTC CAAAAGTATA TTACTCTCAT TGAAACAAAT
ACTTTTTCTC TTAGGGAGAA ATTAATGACA GAAAAACTTT TGATTGAATT AATGCTTAGT
TTATATGATT ACACCTTACT AGAGCAAAAT ATAGCTACAT TATCAGATAA TTCATCGCTA
ATTTTAGCAA AATCAATCGC AGATACAATA CAACAAAATT TTCGAACATT TACTAAGCAA
CCTATCAAAG AAAACCAGCA ACTCCTCTCA ATGCATGAGA TAGCATATTC TTTAAATATA
AGTGAAAGTA CCATGTTGAA AGTCTTTAGA AAAGTTTACT CAATCAGTCC TAAAAATTAT
CTAGATCAAC TCCGTTACAA CGAGTCAAAA TTTCTTCTTC ATCAACCAAA TCTTCCAATT
AGCGAAATTG CTGAAACTAT TGGATATCAG AATCTGTCCC ATTTTTCTCG ACAATTTAAA
CAATGGAGTA ATTTGTCGCC AAAGGAGTAT CGCATTCATT TCCAAAAGAA TGGTCGATAG
|
|---|
| Protein sequence | MNKEPEWLKN IISLPEINMN MKFFGGHQQS VPLGWKIERE AHFAFEIMII LDGVQQTKFD
GCSFNCYQDD IILIPPGMPH ENSCISPTGM HYFCVHFDID DPEIQLNILM LCSVKLNKNN
DAFTKIKSVL QKYITLIETN TFSLREKLMT EKLLIELMLS LYDYTLLEQN IATLSDNSSL
ILAKSIADTI QQNFRTFTKQ PIKENQQLLS MHEIAYSLNI SESTMLKVFR KVYSISPKNY
LDQLRYNESK FLLHQPNLPI SEIAETIGYQ NLSHFSRQFK QWSNLSPKEY RIHFQKNGR
|
|---|
| |