Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_1284 |
Symbol | |
ID | 4432320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 1192293 |
End bp | 1193573 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639667024 |
Product | ABC-type spermidine/putrescine transport system, ATPase component |
Protein accession | YP_809234 |
Protein GI | 116512018 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.508961 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAAA CAATTATCGA ATTTAAAAAT GTCAGTAAAA CCTATGCGGA TACTGATACA ACTGTCCTTA AAGATATTTC ATTTGAACTT GAAGAAGGAA AATTCTACAC ACTTTTAGGT GCCTCAGGTT CAGGAAAATC AACAATTTTA AATATTATTG CCGGACTTCT TGACGCAACT GATGGTGATG TTATTCTTGA TGATAAAAGA ATTAACGACC TACCAGCTAA TAAGCGTAAT GTACACACTA TCTTTCAATC ATATGCCCTT TTTCCAAATA TGAACGTTTT TGATAACGTC GCTTTTGCTC TTAAAATCAA AGGAGTAGAT AAAAAGGAAA TTGCTAAACG TGTCTCAGAA AGTCTAAAAC TTGTTCGTTT AGATGGCTTT GAAAAGCGTT CAATTACGAA ATTATCAGGT GGTCAAAAAC AAAGGGTTGC TATTGCACGC GCTATTATCG ACCGTCCAAA AGTTCTCTTA CTTGATGAAT CTCTATCAGC CCTTGATATG AAACTTAGAA AGGACATGCA ATATGAATTA AGAGAACTTC AACAAAGTCT TGGAATTACA TTTATCTTTG TTACCCATGA CCAAGAAGAA GCACTGGCCA TGTCTGATTG GGTTTTCATC ATGAATGAAG GTGAAATCGT TCAATCAGGC ACACCAACAG ATATATATGA TGAACCAATC AATCATTTTG TCGCTGATTT CATTGGTGAA TCAAACATTC TGAACGGAAA AATGATTGAA GATTACCTTG TAGAATTCAA CGGTCAAAAA TTTGAAGCCG TCGATGGTGG GATGCGTAAA AATGAACCGA TTGAGGTGGT CATTCGTCCA GAAGATATCT GGTTTACTCT TCCTAACGAA GGAAAATTCA ATGTCAAAGT GGACACTCAG CTCTTTCGTG GCGTTCACTA CGAAATTGTA GCTTATGATG AATTTAACAA TGAATGGATA ATCCATTCGA CTCACAAAGC TATTGTTGGT GAAACGGTTG GACTTGATTT TGACCCAGAA GCCATTCATA TCATGCGTCT CAATGAAAGT GAGGAAGAAT TTGATGCTCG GATTGAAGAA TATGTTGAAG AAGAAGAAAC CGTCGGTTTA GCTAAAGCTG TTGAAGAAGA AAATGCTGAA GAGGAAGCGG CCATTCAAGA AGCAGTCAAA GAAGCCCTCG AAAATACAAT GGAGCTGACA GAACTAGCTG AAACCGTTAA TGAAATTTTG CAAAAGCAAG AAAATGAAAC AGAAAATAGT GAAAGTGGGG ATCATAAGTG A
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Protein sequence | MSKTIIEFKN VSKTYADTDT TVLKDISFEL EEGKFYTLLG ASGSGKSTIL NIIAGLLDAT DGDVILDDKR INDLPANKRN VHTIFQSYAL FPNMNVFDNV AFALKIKGVD KKEIAKRVSE SLKLVRLDGF EKRSITKLSG GQKQRVAIAR AIIDRPKVLL LDESLSALDM KLRKDMQYEL RELQQSLGIT FIFVTHDQEE ALAMSDWVFI MNEGEIVQSG TPTDIYDEPI NHFVADFIGE SNILNGKMIE DYLVEFNGQK FEAVDGGMRK NEPIEVVIRP EDIWFTLPNE GKFNVKVDTQ LFRGVHYEIV AYDEFNNEWI IHSTHKAIVG ETVGLDFDPE AIHIMRLNES EEEFDARIEE YVEEEETVGL AKAVEEENAE EEAAIQEAVK EALENTMELT ELAETVNEIL QKQENETENS ESGDHK
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