Gene LACR_1272 details

Gene Information

• Locus tag: LACR_1272
• Symbol: clpX
• ID: 4432411
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactococcus lactis subsp. cremoris SK11
• Kingdom: Bacteria
• Replicon accession: NC_008527
• Strand: +
• Start bp: 1180685
• End bp: 1181920
• Gene Length: 1236 bp
• Protein Length: 411 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 639667012
• Product: ATP-dependent protease ATP-binding subunit ClpX
• Protein accession: YP_809222
• Protein GI: 116512006
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1219] ATP-dependent protease Clp, ATPase subunit
• TIGRFAM ID: [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX)

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.0015948
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAATA CACAAAATCC AAATATTCAT TGCTCTTTCT GCGGAAAGAG TCAAGATGAT 
GTAAAAAAGA TGATTGCCGG TTCAGATGTT TATATCTGTA ACGAATGTAT CGAACTTTCA 
ACTCGTATCT TGGAAGAAGA ATTAAAAGAA GAACAAGATT CAGAGATGCT TGAAGTTAAG 
ACGCCAAAAG AAATGTTTGA CCATTTGAAT GAATACGTTA TTGGTCAAGA AAAGGCCAAA 
CGTGCGCTTG CAGTTGCGGT TTATAATCAT TATAAAAGAA TTAATTTTAC AGCAAGTAAA 
ATTGCTGAAG ATATTGAGCT TCAAAAATCA AATATCTTAC TCATTGGTCC AACAGGTTCA 
GGAAAGACTT TCCTTGCACA GACTTTAGCA AAATCACTCA ATGTTCCTTT TGCCATTGCT 
GATGCGACAA GTTTGACTGA AGCAGGTTAT GTGGGAGAAG ATGTTGAAAA TATTCTCTTA 
AAACTTTTGC AAGCCAGTGA CTTTAATATC GAACGTGCCG AACATGGAAT TATTTACATT 
GATGAAATCG ATAAGATTGC TAAAAAATCT GAAAATGTTT CAATCACTCG TGATGTTTCG 
GGTGAAGGAG TTCAACAAGC CCTTCTAAAA ATTATTGAAG GAACAGTTGC CAGTGTTCCA 
CCACAAGGTG GACGTAAACA CCCTAATCAA GAAATGATTC AAATAGACAC CAAAAATATT 
TTGTTTATTG TTGGTGGGGC TTTTGATGGA ATTGAAGAAA TTGTCAAACA ACGTTTGGGT 
GAAAAAATCA TTGGTTTTGG TGCCAATAAT AAAAAATTGA GCGATGAAGA TTCTTATATG 
CAAGAAATTA TCGCTGAGGA TATTCAAAAG TTTGGGTTGA TTCCTGAATT TATTGGACGT 
CTTCCGATTG TAGCTGCCTT AGAACGCTTA ACTGAAGAAG ACTTAATTCA AATTTTGACA 
GAGCCTAAAA ATGCTTTGAT TAAACAATAT AAACAACTTT TGTTATTTGA TAATGTTGAA 
CTTGAATTTA AAGATGGAGC TCTTATGGCT ATTGCGAAAA AAGCAATTGA GCGTAAAACA 
GGTGCGCGTG GGCTTCGTTC AATTATTGAA GAAGTGATGA TGGATATTAT GTTTGAAGTT 
CCAAGTCATG AAGAAATTAC AAAAGTTATC ATTACTGAAG CAGTTATTGA CGGAAAAGCT 
GAGCCAGAAA TGATTCGAGA GGCCGATAAA AAATGA 

 

Protein sequence

MSNTQNPNIH CSFCGKSQDD VKKMIAGSDV YICNECIELS TRILEEELKE EQDSEMLEVK 
TPKEMFDHLN EYVIGQEKAK RALAVAVYNH YKRINFTASK IAEDIELQKS NILLIGPTGS 
GKTFLAQTLA KSLNVPFAIA DATSLTEAGY VGEDVENILL KLLQASDFNI ERAEHGIIYI 
DEIDKIAKKS ENVSITRDVS GEGVQQALLK IIEGTVASVP PQGGRKHPNQ EMIQIDTKNI 
LFIVGGAFDG IEEIVKQRLG EKIIGFGANN KKLSDEDSYM QEIIAEDIQK FGLIPEFIGR 
LPIVAALERL TEEDLIQILT EPKNALIKQY KQLLLFDNVE LEFKDGALMA IAKKAIERKT 
GARGLRSIIE EVMMDIMFEV PSHEEITKVI ITEAVIDGKA EPEMIREADK K