Gene LACR_1219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_1219 
Symbol 
ID4433677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp1134579 
End bp1137332 
Gene Length2754 bp 
Protein Length917 aa 
Translation table11 
GC content37% 
IMG OID639666962 
Producthypothetical protein 
Protein accessionYP_809172 
Protein GI116511956 
COG category[S] Function unknown 
COG ID[COG2898] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.316039 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACA AAAAAACTAA AAGCTCTAAG GCTAAAAAAA TAAAAACAGT TAAAGCTTGG 
CAAGAAACTG CCGCCAAGCT TTTGGGTATT TTATTACAAT TCGCCTCAAT TTATGCTCTA
ATTGTCGGAT TAGTAGGTTG GCTAATGCCC CCTGTTCAAA AATTTATTTC AGGATTTTTA
TATCTCTTTG GCCTTCCAAC TGATTTCAGT ATTTTTAATG CCATTGTTCT TTTTATTCTT
GCCAGTTCAA TTCGCCATCG TAGAAGATTG GCTCTTTGGA TAGAGGTAAT TTATTTTCAG
TTTGCCTTTG TTATTTTAGG AATAATTTTC TTGGCATCTT ACTTTTCAGG ACTTGTTAGC
AAAGAGACTT TAGAGGCAGC TAATTTTTCA ATCTTGTCCC TCTCATTTGT CATCCTAGGG
GTTCTTATTT CTTTAGCAAC AGTAATAGTA ATGATTCTTT CTAGAAATGC TTTTCCTACA
AAAATTGTTA ATGGAACATG GTGGAAAGCA CTGATTATCG CAACGGGAGG ATTTGTCAGC
TCAATCATTG GTGGAGTGGT GGCTTCATAC TTGACCTATC ATGGTTCAGT CACACTAGGC
CAAAGAATTT TTTATGTATT TAAAGAATCG GTCAGTGATT TTCGTTACCT TCTTCCATTT
GGACAAAACA TTTTTAATTA CAGCTCAGGT AATAATATTT GGGTGAGTAG CACAATCTCA
GTCATTATGT TACTTGGTTT CATAAGCGCT TTTTTGATGT TTACTCGCTC TACTCAAAGA
GAACTTTCAG GAAATGCTAA ACAAGAATTA GCAGTTCGTC AGTTAATTTT AGACTATGGA
GATGAAGATT CTCTTGCTTA TTTTGCGACT CGCAGAGATA AAAAAGCGAT ATTTTCAAAA
AATAAAAAGG CAACCATTAC TTATCATCTT TTTGGTGATG TCTTGCTTGC AAGCGGTGAT
CCTATCGGAG ATGAAAAATC TTGGAAGAGT GCAGGAGAAG CCTTCTTAAG TCTTGCACGG
GCGCATGGAT GGACTCCGGG CGTCGTTGGT TCATCGGAAA AAGGAAGCAA GATTTATTAT
CAATTAGGCT TAAATGCAAC AGTTTTTGGT GATGAGGCTG TGGTTCTTGT GCCAGAGTTT
TCTATTGAAA ATGCGGCGAT GCACGATGTT GCTCAAGTCA TGCGTCGGGC AGAACGAGAA
AATTATCAAG TGAAGATTCG ACGTCAAGCT GACATCCCTT CTGAGGAGTT AATTGAACTT
ACTAGATTGA CAGAAGAATG GAGAAATGGA GATGAGCGAG GTTACTCAAT GACTTCAAGT
CGATTTGGGG ACCCAACTGA CCAACAAATG ATGATTGTGA CCGCAAATGA TTCTGAGGGA
AATTATCAAG GAATTCTCTC ATTTGCTCCG GTAGGCTCAG ACAAACTTTC ACTGGATACC
ATGCGTCGCT CGCCGAATGC AATGAATGGT GTAGTAACTT TTATGATTAC AAGCCTGATT
GAGGCTGGAA AAGAAGAAGG ACTAACTGAA ATTAGTTTGA ACTTTGCTGC TGCCCGTCAA
TTTTTCATAA ATGGGGAAAC TTTACAAGCT AATGCCTTGG ATAAAGCTGC TCGAAAAGTA
ATGAAATTTT TCTCACGCTG GTATCAACTA GAGTCTCTTT ATCGTTCAAA TGATATCTAT
CTGCCAGAAT GGCGCACACG ATATATCTGT TATGATAATG GTGGCTCGTT AACCTCAGTT
CTTTTTACGA TTGGACAAGC AGAAGGGTTC GTTCCGACAA ATATTTCATC AAAAATTAAA
GGATTTTTCT TCCATGATTA TGAGAATAGC ATTGAAAATC ATTGGTGGGA AAAGTCATCT
TTTATCAAAA ATGTTCATCA GATTGAAGAG AAAAAAAGGT TGGAATTGTC AAATGAAAAT
AATCATGATG ATACTTATCT ACAAAAACTT AATGATTTAA AACAACTCGG GATTGCACCA
TACAGCCTTC CAGAAGCAGA TTTTGAGTCA GTTAAAAATC TCCGAATGAA TTATGAAAAC
ACTGACGAGT TTGATGAAGA GGAACATTCG ATACAAGGAA GACTTGTCAG CTCGCGTGGA
CGTGGCGCAA TATTCTTTGC TGATTTATCA GATAACCAAT CAAAGATTCA ATTGGTCATA
AAACGTGACG TCATCAATGA ATATTCTGAA TCAGAAAATC GTTTGGAAAA TTTTGCAACC
TGGAAAAAAG ATGTGACTAT CGGTGACAGA GTACTAGTTA AAGGAGTTCT CATGCGGACA
CAGATTGGAG AATTGAGTTT GCGGGTAAAT TCATGGAAGA TGCTTTCTAA AACTCTAGTA
GAGCTGACAG AAGAGAGAAA AGTAAGTCAA ACTACCTTTA TTGAACAGAC AGAGAAATTT
TCTAAGATAA GAGAATCATT GATATTAAAT GGTTTCATCG AAGTCGCAAA ACAGGAGTAT
TTAGCTCTGT CAGTGGGCTA TGATAAAGTT TTTTCTATAC ATAATTTGAA AATTAATCTT
CTTTGGGCTT ACCGATCAGC GGACGATGTC AGAGAATTTC TCAGTAAAGT GATAGATGAG
GACTCCTCAG TAAACTTATC AGAGATTTTT CCAGATCCAG AAATGAATAA AGAAGGAACT
CCAGAACTTA AAAGAGCACT CTCCTTTGGG TTACCTGCAT TTACAATGGC AGAAATCTTT
ATAAGTGAAG AAACAAGTAA CTTAGGAGTA AATAATAAAA ATGAGAAAAA GTAA
 
Protein sequence
MKNKKTKSSK AKKIKTVKAW QETAAKLLGI LLQFASIYAL IVGLVGWLMP PVQKFISGFL 
YLFGLPTDFS IFNAIVLFIL ASSIRHRRRL ALWIEVIYFQ FAFVILGIIF LASYFSGLVS
KETLEAANFS ILSLSFVILG VLISLATVIV MILSRNAFPT KIVNGTWWKA LIIATGGFVS
SIIGGVVASY LTYHGSVTLG QRIFYVFKES VSDFRYLLPF GQNIFNYSSG NNIWVSSTIS
VIMLLGFISA FLMFTRSTQR ELSGNAKQEL AVRQLILDYG DEDSLAYFAT RRDKKAIFSK
NKKATITYHL FGDVLLASGD PIGDEKSWKS AGEAFLSLAR AHGWTPGVVG SSEKGSKIYY
QLGLNATVFG DEAVVLVPEF SIENAAMHDV AQVMRRAERE NYQVKIRRQA DIPSEELIEL
TRLTEEWRNG DERGYSMTSS RFGDPTDQQM MIVTANDSEG NYQGILSFAP VGSDKLSLDT
MRRSPNAMNG VVTFMITSLI EAGKEEGLTE ISLNFAAARQ FFINGETLQA NALDKAARKV
MKFFSRWYQL ESLYRSNDIY LPEWRTRYIC YDNGGSLTSV LFTIGQAEGF VPTNISSKIK
GFFFHDYENS IENHWWEKSS FIKNVHQIEE KKRLELSNEN NHDDTYLQKL NDLKQLGIAP
YSLPEADFES VKNLRMNYEN TDEFDEEEHS IQGRLVSSRG RGAIFFADLS DNQSKIQLVI
KRDVINEYSE SENRLENFAT WKKDVTIGDR VLVKGVLMRT QIGELSLRVN SWKMLSKTLV
ELTEERKVSQ TTFIEQTEKF SKIRESLILN GFIEVAKQEY LALSVGYDKV FSIHNLKINL
LWAYRSADDV REFLSKVIDE DSSVNLSEIF PDPEMNKEGT PELKRALSFG LPAFTMAEIF
ISEETSNLGV NNKNEKK