| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_1180 |
|---|
| Symbol | rplU |
|---|
| ID | 4432457 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | + |
|---|
| Start bp | 1095680 |
|---|
| End bp | 1095994 |
|---|
| Gene Length | 315 bp |
|---|
| Protein Length | 104 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639666926 |
|---|
| Product | 50S ribosomal protein L21 |
|---|
| Protein accession | YP_809136 |
|---|
| Protein GI | 116511920 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0261] Ribosomal protein L21 |
|---|
| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00135426 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAACT ATGCAATCAT CAAAACTGGT GGTAAACAAG TTAAAGTTGA AGAAGGTTCA
GTAATCTACG TTGAAAAACT CAATGTTGAA GCTGGTCAAA CCGTTACTTT CGACGAAGTT
ATCTTTGTCG GAGGCGAAAC AACTAAAGTT GGTGCACCGC TCGTTGAAGG CGCAACTGTT
GTTGGTGAAG TCGAAAAACA TGGCAAGCAA AAGAAAGTTG TTACTTTCCA ATACAAACCT
AAAAAACACT CACACCGTAA ACAAGGTCAC CGTCAACCAT ACACTAAAGT TGTTATCAAA
TCAGTTAACG CTTAA
|
|---|
| Protein sequence | MSNYAIIKTG GKQVKVEEGS VIYVEKLNVE AGQTVTFDEV IFVGGETTKV GAPLVEGATV
VGEVEKHGKQ KKVVTFQYKP KKHSHRKQGH RQPYTKVVIK SVNA
|
|---|
| |