Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_1176 |
Symbol | |
ID | 4432453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 1091560 |
End bp | 1092375 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639666922 |
Product | HAD superfamily hydrolase |
Protein accession | YP_809132 |
Protein GI | 116511916 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.534777 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAAC TCGTTGCTAT TGACCTTGAC GGAACTTTAC TTGACCCAAA TCGCCAAATT ACTGCCGAAG TAAAATCTGC TGTAAAAAAA GCCAAAGCGG CTGGTGTTAA AATTGTTATC ACAACCGGTC GTCCTTTACC AGGTGTAGTT GATATCCTTA AAGCACTCGA ATTAACTGAC CAAAGTGATT ATGTCATTAC TTACAATGGT GGATTGGTCC AACGTGCAAC AGGTGAAAAA TTTATCAAAG AAACATTAAG TTCCGAAGAT TGGTTAGACC TTGATGCGGC CGCCCGCAAG ATTGGTCTCC CTATCCATGC GATAACCCGC GAAGGAATCT ATACTCCGAA TCATGATGTT GGAAGATATA CCGTTCAAGA AGCTCAAATG GTAAAAATGC CACTTTATAT TCGTCAGCCA GAAGATATCG CTGCTTTAGA AATTGCTAAG GTAATGATGG TTGATGAACA AGAGGCACTT GATGATGGAA TTGCTTATCT CCCCTTTGAA TTTTTCGAGC GTTATAATGT GGTCAAATCA ACACCCTACT ATTTAGAATT TATGAATAAA AAAGCTAGTA AAGGGTCTGC GGTTAAACAC TTAGCTGAAA AACTTTCTTT TGATTTAGAT GAAGTCATGG CCATCGGTGA TGAAGAAAAT GACCGTTCAA TGCTTGAAGT TGCTGGTTGT CCCGTTGTAA TGGAGAACGG AAAAACCGAA CTGAAAAAAA TCGCTAAGCA CATCACAAAA TCAAATGCCA AATCTGGTGT TGCTCATGCC ATAAATGAAT GGGTTTTAAA AGATTACCAA GCTTAA
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Protein sequence | MIKLVAIDLD GTLLDPNRQI TAEVKSAVKK AKAAGVKIVI TTGRPLPGVV DILKALELTD QSDYVITYNG GLVQRATGEK FIKETLSSED WLDLDAAARK IGLPIHAITR EGIYTPNHDV GRYTVQEAQM VKMPLYIRQP EDIAALEIAK VMMVDEQEAL DDGIAYLPFE FFERYNVVKS TPYYLEFMNK KASKGSAVKH LAEKLSFDLD EVMAIGDEEN DRSMLEVAGC PVVMENGKTE LKKIAKHITK SNAKSGVAHA INEWVLKDYQ A
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