Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_1162 |
Symbol | |
ID | 4433919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 1080025 |
End bp | 1080864 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639666908 |
Product | transposase |
Protein accession | YP_809118 |
Protein GI | 116511902 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000280692 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGACGCT TTATCAAAAC GAGGGTTCCC CTTGAGGTTC AAAACCGAAA GAACGTCCAT CTCGCAACAT CAGATTGCTT AGTTATCGCT TGTTACCTCT GGGGCGTACT GCATTTTAGT GAAACGCTTA AAGCTAAGCA CCAACTTGCT CAAAGTTTAT TTCCTAATTT CCTAGAATAT TCTCGCTTTG TCCGTCGTTG TAATGCCCTC TTACCGAGTA TCCAAGTCAT TCGCCAAGCA CTCGTCTTTA AAGAGGTTGA AGGAATTAGT GTATCCATTA TTGACAGCTT CCCCATTCCT TTGTGTCAGC CTATTCGTAA TTTCAGAAGC AAAGGTCTTG GAGATTATGC AAATGTTGGC TACAATGCTA CAAAGGGACA GTACTTCTAT GGATGTAAAT GTCATGCTTT AGTCAGTGAA TCAGGCTATG TCATAGACTA CACAATTACT CCTGCTTCAA TGGCTGATAG TTCAATGACC GAGGAAGTGT TGAGTCAATT TGGGACACCA ACAGTCCTTG GAGATATGGG ATATTTAGGT CAGTCACTGC ATGATAGGCT GGAATTAAAA GGAATTGAGC TAATGACACC TGTCAGGAAG AACATGAAGC AAAAGAAAAT CCTTTTCCCT AATTTTTCAA AACGTAGAAA AGTGATTGAG CGAGTTTTCT CTTTTTTGAC AAATCTAGGA GCTGAGCGTT GTAAAAGTCG TTCGCCTCAA GGTTTTCAAT TGAAATTAGA GATGATACTT TTAGCGTATT CTTTACTGTT AAAATCAGCT AAATCACTGG AACCAGAGAC TTTAAGATAT TCTATCGGGT ATCAAGTCAT GGCTAAATAA
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Protein sequence | MRRFIKTRVP LEVQNRKNVH LATSDCLVIA CYLWGVLHFS ETLKAKHQLA QSLFPNFLEY SRFVRRCNAL LPSIQVIRQA LVFKEVEGIS VSIIDSFPIP LCQPIRNFRS KGLGDYANVG YNATKGQYFY GCKCHALVSE SGYVIDYTIT PASMADSSMT EEVLSQFGTP TVLGDMGYLG QSLHDRLELK GIELMTPVRK NMKQKKILFP NFSKRRKVIE RVFSFLTNLG AERCKSRSPQ GFQLKLEMIL LAYSLLLKSA KSLEPETLRY SIGYQVMAK
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