| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_1160 |
|---|
| Symbol | pyrC |
|---|
| ID | 4433917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | + |
|---|
| Start bp | 1077239 |
|---|
| End bp | 1078510 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639666906 |
|---|
| Product | dihydroorotase |
|---|
| Protein accession | YP_809116 |
|---|
| Protein GI | 116511900 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0044] Dihydroorotase and related cyclic amidohydrolases |
|---|
| TIGRFAM ID | [TIGR00857] dihydroorotase, multifunctional complex type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.94631 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTTTAT TAATCAAAAA TGGTCGTCTG ATTGACCCTA AATCAAATCG TGATGAAATT
TTAGATGTTT TAATTGAAGA GAATAAAATA GCTAAAATTG GCACAAACTT ATCAGAAGAA
AATACTGAAA TCATTGACGC AAGAGGTCTA GTGATTGCTC CTGGATTGAT TGACGTTCAT
GTTCATTTTC GTGAACCAGG ACAGACCCAT AAAGAAACGA TTCATAGCGG CGCAAAATCA
GCAGCGGCAG GTGGTTTTAC AACGGTTGTC ATGATGGCCA ATACGAAACC TATTTTATCT
ACGCCAAAAG TATTGACAGA GACTTTAGCA ATTGCCAAAA AAGAAGCAAT TAAGATTAAA
GCAGTTGCAT CAATTACGCA AGATTTTGAT GGGGAAAACT TGACAGATTT TGCTGAACTT
ATCAAAGCAG GGGCAATTGG TTTTTCTGAC GATGGCATTC CGTTGACAGA CGCTGGAGTC
TTGCGCAAAG CCTTACAGAA AGCCAAACTA ACAGATAGTT TGCTTTCGAT TCATGAAGAA
GACCCAAATC TAATCGGGAC ACTTGGAGTT AATGATGGAG AAGTGGCTCA TAAATGTGGC
TTCACAGGAG CGCCAACCGT TTCAGAATAT AGTATGATGG CGCGTGATGC TATGATTGCC
TATGAAACAG GCGCACGCTT GCACTTACAG CATCTGTCTG CAGGAGAATC TGTCGAAGTG
GTTCGATTTG CTAAAAATTT GGGCGCGAAA ATTACAGCAG AAGTGACACC ACAACATTTT
TCAATTACAG AACAGATGAT TTTTGAGCAA GGGACAAATG CGAAACTCAA TCCTCCATTG
CGTAGAGATG CAGATATCAG TAAAATTATT GCGGGCTTAA AAGATGGGAC AATTGATGTG
ATTGCGACTG ACCATGCCCC TCATACTCAT GAAGAAAAAA ATGTCAGCAT TGATAAAGCC
CCATCAGGAA TGATTGGCTT AGAAACTTCA TTGCAACTTG GTTTGACGAA TTTGGTTGCC
AAAGGTCATT TGACTTTACT CGAATTACTG ACAAAAATGA CCCTCAATCC AGCTAAATTA
TATGATTTTG ATGCAGGTTA CCTTGCAGAA GCTGGTCCGG CAGACCTTGT GATATTTGAT
GCCGAAAAGA CCTATCAAGT TGGTGAAACT TTTGATTCCA AAGCGACCAA CTCACCGTTT
ATCCATCAAA AAGTTCAAGG ACAAGTTAAA TATACAATTT GTGACGGAAA TATAGTTTAT
CAAGCAAAAT AA
|
|---|
| Protein sequence | MTLLIKNGRL IDPKSNRDEI LDVLIEENKI AKIGTNLSEE NTEIIDARGL VIAPGLIDVH
VHFREPGQTH KETIHSGAKS AAAGGFTTVV MMANTKPILS TPKVLTETLA IAKKEAIKIK
AVASITQDFD GENLTDFAEL IKAGAIGFSD DGIPLTDAGV LRKALQKAKL TDSLLSIHEE
DPNLIGTLGV NDGEVAHKCG FTGAPTVSEY SMMARDAMIA YETGARLHLQ HLSAGESVEV
VRFAKNLGAK ITAEVTPQHF SITEQMIFEQ GTNAKLNPPL RRDADISKII AGLKDGTIDV
IATDHAPHTH EEKNVSIDKA PSGMIGLETS LQLGLTNLVA KGHLTLLELL TKMTLNPAKL
YDFDAGYLAE AGPADLVIFD AEKTYQVGET FDSKATNSPF IHQKVQGQVK YTICDGNIVY
QAK
|
|---|
| |