| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_1158 |
|---|
| Symbol | |
|---|
| ID | 4433915 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | + |
|---|
| Start bp | 1074129 |
|---|
| End bp | 1076036 |
|---|
| Gene Length | 1908 bp |
|---|
| Protein Length | 635 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 639666904 |
|---|
| Product | ABC transporter ATPase |
|---|
| Protein accession | YP_809114 |
|---|
| Protein GI | 116511898 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTAT TGCAAGGAAA TGGAATCGCA CGAACTTTTG GTGGCGATGT CTTATTTGAA
AACATTAGTT TCAGCCTACA AGACCATTCA AGAATAGCTT TAGTTGGACG AAACGGTGCT
GGTAAATCAA CTTTGCTTAA AATTATTGCT GGGGTTGAAG AAGCAAGTCG TGGAACCATT
TCAAAAACAA AAGACTTAAG CATGAATTAT TTGGCTCAGG ATACTGGCTT AAATTCGCAA
AGGACAATTT TTTCTGAAAT GTTGTCTGTT TTTGACCAGC TTCGTCAAAT GGAAAAGCAA
TTGCGTCAAA TGGAACTGCA AATGGGAGAA CTTGGCGCTG ATGAATTGAC GCTTTTAATG
AAGCGCTATG ACTCATTGTC AGAAGAATTT CGCATGAAAA ACGGCTTTAC TTATGAATCT
GAAATTAAGT CAGTTTTAAA TGGTTTTCGT TTTGATGAGT CAATGTGGGA ACGTGAAATT
TCAAGTTTAT CAGGTGGACA AAAAACGCGC TTAGCCCTAG CGAAAATGCT TTTAGAAAAA
CCACAGCTGT TGATTTTGGA CGAACCAACT AACCACTTGG ATATTGAAAC TTTGGCTTGG
CTTGAAAATT ATCTTAAAAA TTATGATGGT AGTTTACTAA TAGTCAGCCA TGACCGGTAC
TTTTTGGATA AGGTAGTCAA TGAAGTTTTA GAGTTATCAA GAGGCGATTT GACTCGTTTT
TCTGGTAATT ACTCACGGTA TGTCGAACAG CGGGAGCAAA AACTTCTATT AGAACTTAAA
AACTTTGAAA AGCAACAAAA AGAAATTGCA AAATTAGAAG ACTATGTTGC CAAAAATCTA
GTGCGTGCTT CAACGACCAA AATGGCACAA TCGCGTCGCA AAAAATTAGA AAAAATGGAT
CGACTGGATG CGCCAACGAG CGATGACAAA TCGGCTCATG TTACTTTCAC GCCAGAAAAA
ACCTCAGGAA ATGTTGTCCT GACCGTGTCA GAGGCTACGG TAGGCTATTC AGACAATCGT
CTATCTGGAC CAATCAATAT TGATGAACGC AAAGGGGAAT CTTTGGCTAT TGTTGGGCCA
AACGGTGTGG GTAAAACGAC CTTAATCAAA TCCATTGTCG GTCAAATCCC TTTTTTGGCT
GGCCAAGCAA AACTGGGTGC TAATGTTACC TTGGGATATT ATGATCAAGA ACAAGGGCGC
TTGACGACTT CAAATACCGT TTTGGACGAA TTGTGGAATG AACATCGCTT GCTTAATGAA
GTGGAAATTC GCAATATGTT AGGTGCCTTT CTTTTTAGCG GTGATGATGT CAAGAAAACA
GTGGGAATGC TCTCTGGTGG GGAAAAAGCA CGTCTTTTAC TCGCAAAATT AGCAATGAAT
CATGATAATT TCTTAGTCTT AGATGAACCT ACGAACCATT TGGATATTGA CTCACGGGAA
GTTTTAGAAA ATGCTTTAAT TGATTTTCCT GGAACAATCT TGTTTGTTTC CCATGACCGT
TACTTTATTA ATCGTGTAGC GACAAAAGTT TTAGAAATCG CTCCAGAGGG AAGTACAGAA
TTTTTGGGCG ATTACGACTA TTATGTTGAG AAAAAAGAAG AACAGTTAGC CCAGAGTGAT
GAATCAGACA ATGGGGGGCT TGTAGAAAGT CTTGCTCAAC AAGATTTTAC GGCTCAGAAA
GAAGCCCAAA AAAATCGTCG AAAAGTGGAG CGAGAAATTA CTTCTTGTGA GGAAAAACTA
GCAGAGTTAG AAATAAAAAT TGAAACACTT ATGCTTCAAA TGCAAGAAAA TACTTCTGAT
TTTGTGAAAT TAGGTGAATT ACAAGCTGAA ATTGACCTTC TTAATGATGA AAAAGACGAG
ACAGAGATGA CTCTTTTAGA AGCAATGGAA GAATTAGAAA GTTTGTAA
|
|---|
| Protein sequence | MILLQGNGIA RTFGGDVLFE NISFSLQDHS RIALVGRNGA GKSTLLKIIA GVEEASRGTI
SKTKDLSMNY LAQDTGLNSQ RTIFSEMLSV FDQLRQMEKQ LRQMELQMGE LGADELTLLM
KRYDSLSEEF RMKNGFTYES EIKSVLNGFR FDESMWEREI SSLSGGQKTR LALAKMLLEK
PQLLILDEPT NHLDIETLAW LENYLKNYDG SLLIVSHDRY FLDKVVNEVL ELSRGDLTRF
SGNYSRYVEQ REQKLLLELK NFEKQQKEIA KLEDYVAKNL VRASTTKMAQ SRRKKLEKMD
RLDAPTSDDK SAHVTFTPEK TSGNVVLTVS EATVGYSDNR LSGPINIDER KGESLAIVGP
NGVGKTTLIK SIVGQIPFLA GQAKLGANVT LGYYDQEQGR LTTSNTVLDE LWNEHRLLNE
VEIRNMLGAF LFSGDDVKKT VGMLSGGEKA RLLLAKLAMN HDNFLVLDEP TNHLDIDSRE
VLENALIDFP GTILFVSHDR YFINRVATKV LEIAPEGSTE FLGDYDYYVE KKEEQLAQSD
ESDNGGLVES LAQQDFTAQK EAQKNRRKVE REITSCEEKL AELEIKIETL MLQMQENTSD
FVKLGELQAE IDLLNDEKDE TEMTLLEAME ELESL
|
|---|
| |