Gene LACR_1074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_1074 
Symbol 
ID4434294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand+ 
Start bp1016864 
End bp1018060 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content38% 
IMG OID639666821 
ProductGTP cyclohydrolase II 
Protein accessionYP_809032 
Protein GI116511816 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II
[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.554349 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCAAT ATAATACAGT AGAAGAAGCC TTAACAGCCC TTAAAGCAGG CGAAATGATC 
ATTGTCACTG ATGACGAGAA TAAAGAAAAT GAAGGAGATT TGATTTGTGC AGCCGAAATG 
ATTAGTCCAG AAAAGATAAA CTTCATGGCC AGTCAGGCAA AGGGATTAAT TTGTAGTCCG 
ATGAGTGAAA AATATGCTAA GAGTCTGCAT TTGTCAGCAA TGACGGAGAG AAATACAGAC 
AACCACGGGA CAGCTTTTAC TGTTTCTGTC GATCATGTAG AGACAAGTAC AGGGGTATCA 
GCCTTTGACC GTTCGCTGAC TATTAGAAAA CTTGCTGATG AAGAAAGTTC AGTCGAAGAT 
TTTCGAAGAC CTGGTCATGT CTTTCCTCTG ATTGCAAAGA AAAAAGGAGT CTTAGAACGC 
AATGGACACA CAGAAGCAAC AGTTGATTTG TTACGACTTG CTGGTCTAAA GGAAGTGGGA 
GTTTGTGTTG AAATAATGGC CGAAGATGGT AGCATGATGC GCACAGAAGA ACTTCAAGAA 
AAAGCAAAAG AATGGGACTT GAATTTTATC ACAATCAAGG CCATACAAGA ATATCGAAAA 
CAAAATGAAC AACTGGTTGA GCAAGTTACC AGAGCGAAAC TTCCAACAAA ATATGGTTAT 
TTTGAAATCT TTGGATTTGT CAATAAAATA AATGGTGAGC ATCATGTCGC CCTAGTTAAG 
GGGGACATTG GAGAGGGAGA AGCAGTGCTT TGCCGAGTTC ATTCGGAATG TTTGACTGGA 
GATGCTTTTG GCTCAATGAA ATGTGATTGT GGTGAACAAT TAGAACAAGC TCTAACACAG 
ATAAATGCCG AGGGACGAGG GGTTTTATTA TATCTTCGGC AAGAAGGGCG AGGAATCGGT 
TTAATCAACA AACTTCGTGA TTATTCACTT CAAGATGAGG GGCTTGATAC AATTGAAGCA 
AATTTAGCCC TAGGTTTTGA AGAAGATGCG CGTGAATACT CCATAGGTGC TCAAATTCTG 
AAAACACTTG GTGTGAAGTC TTTAAGATTA ATGACTAATA ACCCACAAAA AATCAATGAT 
TTTTCAAAAT ATGGGCTACC AGTTAAAGAA AGAGTTCCAA TTCAAATTAA AGAAAATGAA 
TTTGATCAGG ATTATTTAAA AGTAAAGCAA AATAAAATGG GACATTTGTT CGATTAA
 
Protein sequence
MFQYNTVEEA LTALKAGEMI IVTDDENKEN EGDLICAAEM ISPEKINFMA SQAKGLICSP 
MSEKYAKSLH LSAMTERNTD NHGTAFTVSV DHVETSTGVS AFDRSLTIRK LADEESSVED 
FRRPGHVFPL IAKKKGVLER NGHTEATVDL LRLAGLKEVG VCVEIMAEDG SMMRTEELQE 
KAKEWDLNFI TIKAIQEYRK QNEQLVEQVT RAKLPTKYGY FEIFGFVNKI NGEHHVALVK 
GDIGEGEAVL CRVHSECLTG DAFGSMKCDC GEQLEQALTQ INAEGRGVLL YLRQEGRGIG 
LINKLRDYSL QDEGLDTIEA NLALGFEEDA REYSIGAQIL KTLGVKSLRL MTNNPQKIND 
FSKYGLPVKE RVPIQIKENE FDQDYLKVKQ NKMGHLFD