Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_1033 |
Symbol | |
ID | 4434071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 974572 |
End bp | 976476 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639666782 |
Product | fusion of IIA, IIB and IIC component of mannitol/fructose-specific phosphotransferase system mannitol/fructose-specific |
Protein accession | YP_808993 |
Protein GI | 116511777 |
COG category | [G] Carbohydrate transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component [COG1445] Phosphotransferase system fructose-specific component IIB [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component [TIGR00848] PTS system, fructose subfamily, IIA component [TIGR01427] PTS system, fructose subfamily, IIC component |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.194757 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATTA AAGATTTATT AAAAACAGAG GTTATGATTC TTGACCTCCA AGCAACTAGC AAAGAAGCTG TTATTGATGA AATGGTCAAT AAATTAGTTT CTGAAGGTTA TGTCAGTGAT TTTGCAACTT TTAAAGCAGG AATTATGGCA CGTGAAGCGC AAACTTCAAC TGGACTTGGT GACGGGATTG CCATGCCTCA CAGTAAAAAT ACCGCTGTTA ATGAACCGGT TGTTCTATTT GCAAAATCAA AAACTGGTGT TGATTACGCG GCATTAGATG GTCAACCTGT CAATCTTTTC TTTATGATTG CAGCCCCAGA TGGTGCTAAT GATACTCACT TAGAAGCTTT GGCACAACTT TCCACTTATC TTCTTAAAGA CGGTTTCCAA GACCGTTTGA GAAAAGTTGA ATACCCACGC GAAGTCATTC AACTCTTTTC TGAAAAACAA GAAGAAGTTG CAACTCTAGA AAATGCTGAA CATTACATTG TAGCTGTAAC AGCATGTACA ACAGGAATTG CCCATACTTA CATGGCTGAA GAAGCACTTA AAAAACAAGC CTTGGAAATG GGTGTTGGTA TAAAGGTTGA AACCAATGGT GCGCGTGGAA TTGATAATAA ATTAACTTCA GCTGATATTC AAAAAGCTGA TGCTGTTATC GTAGCTGCGG ACAAAAAAGT CGAAATGAAT CGTTTTGCTG GTAAAGAAAT GGTTCAAGTT CCAGTTGCAC ACGCCATTCG AGATACGGAA GAATTAATTA ATCGTGCACT TTCAGGAAAT GCACCAATCT ATGAAGCAGA TGGAACGGAT GAAGTAAAAG AAGAATCATC TGGTGGCTTA GGTAAAGCTT TCTATAAACA CTTAATGGGT GGTGTTTCTG CAATGCTTCC ATTCGTTGTC GGAGGTGGGA TTCTTATCGC TCTTGCTTTC TTGATTGACC AAGCGATGGG AGTTCCTCAA AGTCAATTGG CCAACCTTGG AGTTTATCAT CCTTTAGCTG CTTACTTTAA AAATGTTGGG GGCGCGGCTT TTGCCTTTAT GTTACCTGTT TTAGCCGGTT TCATTGCAAA CTCAATCGCT GATAAGCCTG GTTTAGTTGC TGGTTTTGTC GCTGGTTCGA TGGCATCATC TGGTTTGGCC TTTGGTCATT TAGACCCTGC TAAAATGATT CCGTCAGGTT TCTTAGGCGC CTTGGTTGGT GGTTTCCTTG CCGGTGGAGT AATTATTATT CTTCGTAAAG TCTTCGCAAA ACTTCCACGT TCACTTGATG GGATTAAAGC TATCTTGATT TATCCATTAG TTGGAACATT TATCACAGGT TTCCTAATGC TCTTTGTCAA TATCCCAATG GCTGCAATTA ATACCGGAAT TTCTAACTTT TTAGCAAGCT TATCAGGAGC ATCTGCCCTT GTTCTTGGTC TAGTTGTTGG TGGAATGATG GCTATTGACC TTGGTGGTCC AATCAACAAA GCTGCTTATA TCTTTGCAAC TGGTACTTTA GCAGCAACAG TTTCAACTGG TGGTTCAGTA ACAATGGCAG CAGTTATGGC TGGTGGGATG GTTCCACCAC TCGCAACTAC AGTAGCTGTT ATCTTGTTCA AAAATAAATT TACCAAAGAA GAACGTAATT CTGGTTTGAC AAACATTGTG ATGGGGCTTT CATTCATCAC TGAAGGGTCA ATTCCATTTG GCGCAGCCGA CCCAGCACGC GCAATTCCAT CATTTATGAT TGGAGCAGCA GTAGCCGGTG GTTTGACTGG TATGGCCAAT ATTAAATTGA TGGCACCACA TGGTGGAGTC TTCGTACTTG CTTTGACTAA TAACCCGTTA CTTTATCTCT TGTTCATCTT GATTGGAGCA ATTGTTTCAG GCCTATTATT TGGAGCTTTG AAAAAAGCTA AATAA
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Protein sequence | MEIKDLLKTE VMILDLQATS KEAVIDEMVN KLVSEGYVSD FATFKAGIMA REAQTSTGLG DGIAMPHSKN TAVNEPVVLF AKSKTGVDYA ALDGQPVNLF FMIAAPDGAN DTHLEALAQL STYLLKDGFQ DRLRKVEYPR EVIQLFSEKQ EEVATLENAE HYIVAVTACT TGIAHTYMAE EALKKQALEM GVGIKVETNG ARGIDNKLTS ADIQKADAVI VAADKKVEMN RFAGKEMVQV PVAHAIRDTE ELINRALSGN APIYEADGTD EVKEESSGGL GKAFYKHLMG GVSAMLPFVV GGGILIALAF LIDQAMGVPQ SQLANLGVYH PLAAYFKNVG GAAFAFMLPV LAGFIANSIA DKPGLVAGFV AGSMASSGLA FGHLDPAKMI PSGFLGALVG GFLAGGVIII LRKVFAKLPR SLDGIKAILI YPLVGTFITG FLMLFVNIPM AAINTGISNF LASLSGASAL VLGLVVGGMM AIDLGGPINK AAYIFATGTL AATVSTGGSV TMAAVMAGGM VPPLATTVAV ILFKNKFTKE ERNSGLTNIV MGLSFITEGS IPFGAADPAR AIPSFMIGAA VAGGLTGMAN IKLMAPHGGV FVLALTNNPL LYLLFILIGA IVSGLLFGAL KKAK
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