| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_1015 |
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| Symbol | |
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| ID | 4434017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | + |
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| Start bp | 954435 |
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| End bp | 956867 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639666764 |
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| Product | exoribonuclease R |
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| Protein accession | YP_808975 |
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| Protein GI | 116511759 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTATC TTGAGAATAG TTCAAAAAAA GCTCTGTCAG TGGAAGAATT GTCAGTTGCT
TTACATATGA ATAAGGCCAA AGATTACAAA TTTTTTGTTA AAACTTTGGC TTCACTAGAA
GCTGAACACT TGCTTCATTT TACTGCTAAA GGGAAAGTAG AATTAGCAGA ACAAGAGGAA
GCAAAAGTAG TTATCAGCGG GATTTTCCGA GCAAATGCGG CTGGATTTGG TTTTGTAAGT
ATTGATGCTG ACGAACCAGA CGTCTTTATT GGACGCGGGC AAACAGGTTT TGCACTTGAT
GGAGATGAGG TTTTCATTGA GATTGATAAG AATGCCAACT CCCTAAAAGG AACGGCTGCC
GAGGGGCATG TTGTTGAAAT TATCCGTCAT GAGCTTCATC AAGTCGTTGG AACTTTTGTT
GCTTTAAATG ATGAAGAAAA AGAGCAAACT GGACTGATTG GTTTCGTTAA ATCTAGAAAT
AAAAAAATCC CTTATCGGGT ATATCTGGGT GATGAAGGAC TCAAACCAGA AAATAAGGCA
ATTGTTCGTG TAGAAATCAC ACATTATCCT GATAAAGAAT TTCCTCAAAC CATGCAAGGA
CTGGTAACGG AAATTATTGG ACAGGCAAAT GACCAAGGGA TAGATGTGTT AGAAGTTTTG
GCTTCAATGG ATATTGTATC AGAGTTTCCA AAAGAAGTTT TGGATCAAGC TGATTCAGTG
CCAGAAGAAG TGCCAGAAAG TGAAATTGCG GGTCGAGTTG ATTATCGTAA TGAAATTACG
TTCACAATTG ACGGAGCTGA TGCCAAAGAC CTTGATGATG CTGTCCATGC CAAACGTTTA
GGAAATGGAA ATTATGAATT AGGTGTTCAT ATTGCGGATG TTTCCCACTA CGTAACGGAA
AATTCACCTT TAGATAAAGA AGCTTACGAA CGTGGAACAT CGGTCTATGT TACTGACAGA
GTGGTACCAA TGTTGCCAGA GCGTTTATCA AATGGGATTT GTTCATTGAA CCCACGTTTG
AATCGCTTGA CTCAATCCTG TGTGATGGAA ATTAGCCCAG AAGGTCGAGT GGTTAATTAT
CAAATTTCAC AATCAATTAT TAAGACAACT GAAAGAATGA CTTATGATGC GGTCAATCAA
ATGATTGCAG GAGCTAAAGA CACGCTTGAA AAGTATGCTA AAATTGCTGA TTCTGTGAAA
ATCATGGTTG AAATCCATCA TATTTTAGAA GCGATGCGTA AACAACGTGG AGCCATTGAT
TTCGACACGG TAGAGGCAAA AATCATTGTA AATGAAAAAG GCTTACCTAT TGAAATTAGA
AAACGCAGTC GTGGCATTGC TGAACGAATG ATTGAATCAT TCATGCTCGA AGCCAATGAA
ACGGTGGCCA CTCATTTTGA AGCACATGGC TTGCCATTTA TTTATCGGAT TCACGAGCAA
CCAAAAGCAG ATAGATTACA AAGATTTATT GATTTTGCAG CAACTTTTGG AATGCAAATT
GAAGGAACCT CAAACGGAAT TGATCAAAAA GTTTTACAAG CCTTCATGAA AAAAAACAAG
GGGCAACCTG GTGAAATGGT CTTGTCAACA ATGCTATTGC GTAGTATGCA ACAAGCTCGT
TATTCAGAAA ATAATGAGGG TCACTTTGGT TTAGCTGCCG AAAATTATAC TCACTTTACC
TCACCTATTC GTCGTTATCC TGATTTGTTG GTTCATCGTT TGATTCGTGA AATTGGTGCG
GGTAAAATTC CAGCAAATCT TTTACAAAAA TGGGAAGAAA AAATCCCAGA AATTGCGGAG
CACTCTAGTC ATCGTGAACG TCGAGCGGTT GATGCTGAAC GTGAAGTTGA AAAAATGAAA
AAAGCCGAGT TCATGGAAGA ACATGTGGAC GAAGAGTTTG AAGGAATTAT TGCTTCAGTC
ACTCGTTTTG GTATGTTTAT TGAACTTGAA AATACAATCG AAGGATTAGT TCATATTTCA
ACGTTGAAGG GTGATTATTT CACTTATCAT GAGCGAATGT TAGCTTTGAT TGGTGAAAGA
ACAGGATTGA CTTTTAAAAT TGGTCAACCA ATTAAAATCA AAGTCGTCAA AGCGGATAAG
ATGACAGGCG AAATTGACTT TGAGTACCTT CCATCAGAAT TAGATTTGAT TGATAAATCG
GCTAAAGCTA AGAAAAAGCC TGAATCTAAA GGTCGCAAAA AATCAAATCA ATCCCTTAAA
GTTAAATCTG TCGCACCAAA AGCTGCTGGT AAAGCTGGCA GTAAATCAAA AGAGGGTAGA
AGTACTGATG AAAAACCTGA ATTTGATAAG AAAAAGAAAA ATTCAGACAA AAAACCTTTT
TATAGCAAAG CTGCCAAAGG TAAATTTACT GACAAAAAAG AGAATGGCAA AAAATTTACT
GATGGAATAA AAAAAGCACA CAAAAGACCT TAA
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| Protein sequence | MDYLENSSKK ALSVEELSVA LHMNKAKDYK FFVKTLASLE AEHLLHFTAK GKVELAEQEE
AKVVISGIFR ANAAGFGFVS IDADEPDVFI GRGQTGFALD GDEVFIEIDK NANSLKGTAA
EGHVVEIIRH ELHQVVGTFV ALNDEEKEQT GLIGFVKSRN KKIPYRVYLG DEGLKPENKA
IVRVEITHYP DKEFPQTMQG LVTEIIGQAN DQGIDVLEVL ASMDIVSEFP KEVLDQADSV
PEEVPESEIA GRVDYRNEIT FTIDGADAKD LDDAVHAKRL GNGNYELGVH IADVSHYVTE
NSPLDKEAYE RGTSVYVTDR VVPMLPERLS NGICSLNPRL NRLTQSCVME ISPEGRVVNY
QISQSIIKTT ERMTYDAVNQ MIAGAKDTLE KYAKIADSVK IMVEIHHILE AMRKQRGAID
FDTVEAKIIV NEKGLPIEIR KRSRGIAERM IESFMLEANE TVATHFEAHG LPFIYRIHEQ
PKADRLQRFI DFAATFGMQI EGTSNGIDQK VLQAFMKKNK GQPGEMVLST MLLRSMQQAR
YSENNEGHFG LAAENYTHFT SPIRRYPDLL VHRLIREIGA GKIPANLLQK WEEKIPEIAE
HSSHRERRAV DAEREVEKMK KAEFMEEHVD EEFEGIIASV TRFGMFIELE NTIEGLVHIS
TLKGDYFTYH ERMLALIGER TGLTFKIGQP IKIKVVKADK MTGEIDFEYL PSELDLIDKS
AKAKKKPESK GRKKSNQSLK VKSVAPKAAG KAGSKSKEGR STDEKPEFDK KKKNSDKKPF
YSKAAKGKFT DKKENGKKFT DGIKKAHKRP
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