Gene LACR_1010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_1010 
Symbol 
ID4432778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand+ 
Start bp950779 
End bp951666 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content37% 
IMG OID639666759 
ProductABC-type amino acid transport system, permease component 
Protein accessionYP_808970 
Protein GI116511754 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.079625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA ACAAAAAAAT AATTCTTGGA ATTGCCTTAC TTTTGGCACT TATCATTTTG 
CCAGCTCTTC CATTTCTCTT AATTAAAGGT CAGTACAACT TTCATGACTT TTGGACAATG 
TTTTTCACAA AGATTTTCAG TTGGTCAGCC TTTGTGGACG CCTTTGTACC AATTATTAAA 
ATGATTCCAT CTTCACTTGA AATGACAATC ATTGCCATGA TTTTTGGTTT GCTTTTGGGA 
CTTATTCTTG CCTTAGTTCG TATCAATAAA ATTCCTATTT TAAATCAACT TCGTGCTTTA 
TTTGTCAGCT TTATTCGTGG AACGCCAATT TTGGTGCAAT TATATCTTTC TTATACAGGG 
ATTCCACTGA TTTTAAAAGC AATCAATATG AACTATGGAA CGAATTATAA TGTGAACACG 
ATTCCGGCAA TGCTTTTTGT AATTGTGGCC TTTGCCCTTA ATGAAGGGGC TTATAATTCA 
GAAACTATTC GAGCAGCGAT CCAATCGGTA GATAAAGGAC AAATTGAAGC GGCTAAATCA 
CTTGGAATGA CGAATTTCCA AGTCTTTATG CGTGTCACTT TGTCAGAAGC GGCAACAGTT 
GCGACAGCTC CGTTAGGAAA TGCTCTGATT GGTCTTTTGA AATCTACTTC ACTCGCTTTC 
GTTGCGGGTG TGGTAGAAAT GACGGCTCGG GCTCAAATTA TTGGTGGCTC AACTTTCCGA 
CTGTTTGAAA CTTATTTGGC CTTAGCCTTG GTTTATTGGC CAATCTGTAT CATTTTTGAA 
ATTTTGATTA GAGCATTAGA GCGCAAGTTG GACGTCAGAA TGCCAAATGA TAAACGTAAA 
AATCGTGCTC AAATTTCTTT GAGTAAAAAT CCGTTTGACC AAGCATAA
 
Protein sequence
MKKNKKIILG IALLLALIIL PALPFLLIKG QYNFHDFWTM FFTKIFSWSA FVDAFVPIIK 
MIPSSLEMTI IAMIFGLLLG LILALVRINK IPILNQLRAL FVSFIRGTPI LVQLYLSYTG 
IPLILKAINM NYGTNYNVNT IPAMLFVIVA FALNEGAYNS ETIRAAIQSV DKGQIEAAKS 
LGMTNFQVFM RVTLSEAATV ATAPLGNALI GLLKSTSLAF VAGVVEMTAR AQIIGGSTFR 
LFETYLALAL VYWPICIIFE ILIRALERKL DVRMPNDKRK NRAQISLSKN PFDQA