| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_1003 |
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| Symbol | deoD |
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| ID | 4432771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | + |
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| Start bp | 944171 |
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| End bp | 944875 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639666753 |
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| Product | purine nucleoside phosphorylase |
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| Protein accession | YP_808964 |
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| Protein GI | 116511748 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0813] Purine-nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00510571 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAACAC CACATATCGA AGCTCAAAAA GGCGAAATCG CAGATAAAAT TCTCTTACCA
GGAGATCCAC TTCGCGCAAA ATTTATCGCA GAAAACTTCC TTGAAGATGC TGTGCAATTT
AACCAAGTTC GCGGAATGCT TGGCTTTACT GGAACTTACA AAGGCCACCG TGTCTCTGTC
ATGGGAACAG GAATGGGAAT TCCTTCAATC TCAATCTATG CTAATGAATT GATTACGGAA
TATGGCGTTA AAAGATTAAT TCGTGTTGGG ACTGCTGGTT CTGTAAATGA AGATGTTCAT
ATTCGCGACC TTGTCATTGG CCAGGCAGCA GCAACAACTT CAGCCATTGT CCGTCATGAT
TTTCCTGATT TTGATTTCCC GCAAATTGCT GATTTTGATT TGCTTGATAA GGCTTATCAT
ATTGCAAAAG ACCTCGGAAT TACAACTCAC GTTGGAAATA TTCTCAGCTC TGATTTGTTC
TATGGTGGAC CAGATGCAGT TAAAGTTGGA AAACTCGGTG TGAAGGCTGT CGAAATGGAA
GCAGCTGGTC TTTATTATCT TGGGGCAAAA TATAAAGTGC AAACTTTGGG AATTATGACA
ATTTCTGACC ATATTTTGAC AGGAGAATCA ACAACGTCTG AAGAACGTCA ATTGACATTT
ACAGATATGA TGAAAGTTGG TTTGGAAACT TTGATTGCTG AATAA
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| Protein sequence | MPTPHIEAQK GEIADKILLP GDPLRAKFIA ENFLEDAVQF NQVRGMLGFT GTYKGHRVSV
MGTGMGIPSI SIYANELITE YGVKRLIRVG TAGSVNEDVH IRDLVIGQAA ATTSAIVRHD
FPDFDFPQIA DFDLLDKAYH IAKDLGITTH VGNILSSDLF YGGPDAVKVG KLGVKAVEME
AAGLYYLGAK YKVQTLGIMT ISDHILTGES TTSEERQLTF TDMMKVGLET LIAE
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