Gene LACR_0983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0983 
Symbol 
ID4432521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp926191 
End bp926838 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content37% 
IMG OID639666737 
ProductP-Ser-HPr phosphatase 
Protein accessionYP_808948 
Protein GI116511732 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTACG AAAATTATAT CTGGGATTTA GGCGGAACTT TGCTAGACAA TTATGAAAGT 
TCTAGCCATG CCTTTGCTGC CACACTATGG TCGATGGCAG AGCGTGTTGT TTTGCGTACT
GACGTATATG ATGCACTGAA AGTTTCAACG GCTTATGCTG TTGAAAAATT TGCGAGTGAT
TTACCGGGAT TTTTAGAGGA ATATAAAAAA TTAGAGGCCG AAGAATTAGA AAAGCCAATT
CTCTTTTCTG GTGCAAAAAA AGTACTGACA AGTCTGTCAG TAAATGGTAA GAAAAATTTT
ATGATTTCAC ATCGTAATCA TCAAGTACTG ACAATTCTGT CAGCAGCAGA GATTGGCTCA
TATTTTACAG AAGTTGTTAC AGCTGATAAT GGTTTTAAAC GAAAACCGGC GCCAGAATCA
ATTAACTATT TGTTGAGCAA GTATAAGCTT AATCCAAAGA AGACAGTGAT GATTGGGGAC
CGCTCATTAG ATATTGAAGC TGGAAATGCT GCTGGAGTAG AAACCATTTA TTTTGATAGC
TCTAATGATT CAATTCAGTC AGTAAAAACA TCTGACACTA CAAAGAATGT CTTACTTACT
AATGAACCGA CCCATATTAT TCATGAACTG ACAGAAATCC TTTTGTAA
 
Protein sequence
MDYENYIWDL GGTLLDNYES SSHAFAATLW SMAERVVLRT DVYDALKVST AYAVEKFASD 
LPGFLEEYKK LEAEELEKPI LFSGAKKVLT SLSVNGKKNF MISHRNHQVL TILSAAEIGS
YFTEVVTADN GFKRKPAPES INYLLSKYKL NPKKTVMIGD RSLDIEAGNA AGVETIYFDS
SNDSIQSVKT SDTTKNVLLT NEPTHIIHEL TEILL