Gene LACR_0979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0979 
Symbol 
ID4432517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp921756 
End bp922655 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content37% 
IMG OID639666734 
ProductDMT family permease 
Protein accessionYP_808945 
Protein GI116511729 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.974492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTAA AAAAACAAAT TTTTAAAGGC ACGCTCTATG CAGTTGTTGC CGGTTGTATG 
TGGGGAATTT CTGGCATTTT TGGTCAGCTT TTTTTCCGTG ACTATCATGG TAGCCCACTT
TGGATTACAT CAACACGTTT AACGATTGCT GGTATTATTT TACTGGCCAT GTCTTATTCG
CGAGACCATA AGCGTTTTTT TGATGTCTGG AAATCAAAAA AGAACATGCC GACGCTATTT
TTGTATGTTT TTGGTGGAGT TTTCTCTGTT CAGTATTTTT ATTATGTTGC CATTCAATTG
TCTAACAGTG CCACGGCGAC AATTTTACAA TATACAGCAC CCGTTTTTAT TATGCTTTAT
TTATTCATTT TCCAAAGACA AGTGCCAAAA CCTAAATCGG TCTTATTTGT TATTTTAGCA
ATGATAGGTG TTTTTTTATT GATTACAAAT GGAAACATCA AACATCTTTC AATTAGTCCA
CTTGCCCTTG TAACAGGCCT TCTTGCGGGT GTTGCGGTCG TAATCTATTC TATCATTCCA
CGTCCTTTAT TGGATAAGTA TGGGGCGTTA AATATGACTG GATGGGGAAT GATGCTTGCG
GGAATTGCTT GTAATATCTT TTATCCAGTC TGGCGGATTA ATTTCCGAAT TGAACCCCTC
TCAATTTTTT ACGTTTTGAC GATTTCTATT GTGGGAACAG CATTGGCTTT TTTATTGCTT
TTAAGAGCAT TCCAGCTAAT ATCACCTCTT GTTGTTTCGG TTGCAACAGC CACTGAACCA
CTGACCTCTG TCTTTTTAAG TATTCCCTTA TTTGGCTTAA AATTAACACT ACTAGAAATG
GTGGGGATTG TGATGGTTAT TGTTTCAGTT ATTCTTTTAT CAAAATCAGA ACAAGCTTAA
 
Protein sequence
MNVKKQIFKG TLYAVVAGCM WGISGIFGQL FFRDYHGSPL WITSTRLTIA GIILLAMSYS 
RDHKRFFDVW KSKKNMPTLF LYVFGGVFSV QYFYYVAIQL SNSATATILQ YTAPVFIMLY
LFIFQRQVPK PKSVLFVILA MIGVFLLITN GNIKHLSISP LALVTGLLAG VAVVIYSIIP
RPLLDKYGAL NMTGWGMMLA GIACNIFYPV WRINFRIEPL SIFYVLTISI VGTALAFLLL
LRAFQLISPL VVSVATATEP LTSVFLSIPL FGLKLTLLEM VGIVMVIVSV ILLSKSEQA