Gene LACR_0942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0942 
Symbol 
ID4433433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp888127 
End bp889014 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content31% 
IMG OID639666701 
Productmalolactic fermentation system transcription activator 
Protein accessionYP_808912 
Protein GI116511696 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000616664 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAA ATTTAAGAGA TCTTGAGTAT TTTTACCAAT TGTCCAAATT ACGATCTTTC 
ACTAATGTCG CCAAATATTT TAGAGTAAGT CAACCCACCA TTTCTTATGC CATTAAAAGG
CTGGAAAGTT ATTACGATTG TGACTTGTTT TATAAAGATT CCTCACATCA GGTGGTTGAC
TTGACGCCAG AAGGTGACCT TTTGGCGATG AGGACAAATG AAATTCTCTC AGAACTAAAT
CATACTAAAA AAGCAATCCA TCGTTCTAGT ATGAAGGACT TTAAAGTTGG TTTTCCTCCA
ATAATAAGTT CCTATCTATT ATCAAAGATA TTAAAAGAAG AAGAAAGTTT AAACTTTTTA
AATGCCTTAC ATATGATTTA TGGCGGTTCA AACGAATTAC TGAGTCAGCT TTTAAATGGT
GAAATAGATT CAAGCTTACT AGGAAGTTTA GAGAAAATTA AACATCCAGA ACTAGAAATT
GAAGAACTTT TTCAAAAAGA ATTTTTCATT ATCATGTCTG ACCACCATCC ATTAGCGAGC
AAGAAAGAAC TTGCCTTTAA AGATTTACTT AATGAAGATT TTATCTTGTT GGGCGAACAT
AATATTCATT TTACTGCTTT TAATTTATTA AACGAGAAAT ATAACCATTC GGCGAATGCT
GTCTTGAAAC TTGATGATGC TCATACGATA AAAGAACTTG TGAGAAAAAA TTTAGGAATT
AGTCTTATGG CAGATATTGG ACTATCAGAA GATTTCAAAC ATCTGGTCAA AATTCCACTT
ATTGAAGCGG ACAAACAATA CTTCCATATC AATTATGCTT ATCAAAAAAT AGCTATTCTT
TCTGAAAGTG AAAAAAACTT TTTAGAAATA TTGAAAACTT TAAAATAA
 
Protein sequence
MNLNLRDLEY FYQLSKLRSF TNVAKYFRVS QPTISYAIKR LESYYDCDLF YKDSSHQVVD 
LTPEGDLLAM RTNEILSELN HTKKAIHRSS MKDFKVGFPP IISSYLLSKI LKEEESLNFL
NALHMIYGGS NELLSQLLNG EIDSSLLGSL EKIKHPELEI EELFQKEFFI IMSDHHPLAS
KKELAFKDLL NEDFILLGEH NIHFTAFNLL NEKYNHSANA VLKLDDAHTI KELVRKNLGI
SLMADIGLSE DFKHLVKIPL IEADKQYFHI NYAYQKIAIL SESEKNFLEI LKTLK