Gene LACR_0941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0941 
Symbol 
ID4433432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp887105 
End bp887767 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content34% 
IMG OID639666700 
Productpeptide ABC transporter ATPase 
Protein accessionYP_808911 
Protein GI116511695 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCTAA AAGTTGAGAA TTTAACTTAT TATTATAGCA ATCCCGATGA TTATTTATTT 
AAAGATGTAA CCGAAAGTTT TGAAAAAGGA ACAATGTATG CCATTCTCGG TCAATCAGGT
TCGGGAAAGA CAACTTTTCT TTCCTTGCTT GCCGGTCTTG ATACTCCCAA ATCTGGGACA
ATGTCTTACA ATGATAAGCC AATCAAATCA AGTAATTTAA CAAATTATCG TAAGAAAACA
GTAAGTACTG GTTTTCAAGC TTATAATTTA TTGACTTACA TGAGTGCTTA TGACAATGTT
AAAACAGCCG TAAAAATCTC GTCAGTAAAA TTTGAGAATG AGAAAGTGGC CATTGAAGAA
GCCCTTAATA AAGTGGGGTT GACCCCAGAT TTGATTTATA AACCTGTCAG TAAATTATCA
GGAGGACAAC AACAAAGGGT AGCCATTGCT AGAGCTTTGG TTTTAAACCA TGATATCATT
ATTGCTGATG AACCAACAGG GAATCTTGAT GAAGAAACAA CGGCACAAAT CGTTGAACTT
TTTAAAGAAA TTGCTCATAC AGATAATAAA ATTGTGATCC TTGTAACTCA CGAAAATGAG
GTGGCTAAAG CCTCAGATAT AGTTTATACA TTAAAACATC GTAAATTTGA AAAAACAGCT
TAG
 
Protein sequence
MTLKVENLTY YYSNPDDYLF KDVTESFEKG TMYAILGQSG SGKTTFLSLL AGLDTPKSGT 
MSYNDKPIKS SNLTNYRKKT VSTGFQAYNL LTYMSAYDNV KTAVKISSVK FENEKVAIEE
ALNKVGLTPD LIYKPVSKLS GGQQQRVAIA RALVLNHDII IADEPTGNLD EETTAQIVEL
FKEIAHTDNK IVILVTHENE VAKASDIVYT LKHRKFEKTA