| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_0895 |
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| Symbol | mnmA |
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| ID | 4433563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | + |
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| Start bp | 837049 |
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| End bp | 838203 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639666655 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_808866 |
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| Protein GI | 116511650 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00179981 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAACA CAAATACTCA ACTTATGTCT GGTAAAAGTC CAGCTCAAAC ACGTGTCGTC
GTCGGAATGT CCGGTGGTGT AGATAGCTCG GTCACAGCAT TGCTTCTTAA AGAACAAGGC
TATGATGTCA TTGGTGTCTT CATGAAAAAC TGGGATGATA CTGACGAGAA TGGGGTCTGT
ACGGCCACTG AAGACTACAA AGATGTCGCA GCAGTCGCAG ACCAAATCGG TGTTCCCTAT
TATTCAGTAA ACTTTGAAAA AGAATACTGG GACCGTGTTT TTGAATACTT CCTTGCCGAA
TATCGTGCTG GACGTACCCC TAATCCTGAT GTCATGTGCA ATAAAGAAAT TAAATTTAAA
GCTTTCTTAG ATTATGCTAT GGAATTAGGA GCAGACTATG TCGCTACTGG TCACTATGCC
CAAGTTCGTA CTGATGAAGA TGGGACTGTT CATATGTTAC GTGGAGCAGA CAATAATAAA
GACCAAACCT ATTTCTTAAG TCAATTGACC CAAGAACAAC TCAAAAAAAC AATGTTTCCT
TTAGGTCATT TGGAAAAACC AGAAGTTCGT AGAATTGCTG AAAAAGCAGG ACTTGCGACT
GCTAAGAAAA AAGATTCAAC AGGAATTTGC TTCATTGGTG AAAAGAATTT CAAAAAGTTC
CTTGGAGAAT ACTTACCAGC ACAACCCGGA AAAATGATGA CACTTGACGG TGTCGAAATG
GGAAATCACG CTGGATTAAT GTATTATACA ATTGGTCAAC GTGGAGGTCT TGGTATCGGT
GGACAACATG GTCAATTAAC AAGTGACCCA TGGTTTGTTG TTGGTAAAGA CTTGACTACC
AATACTCTTT ATGTTGGACA AGGTTTCCAC CATGAACATC TTTATTCAAC AAGTCTTGAT
GCAAGCGATT TGAGCTTTAC CAGAGAAATG CCAGAAACTT TTGACCTTCA CTGCACAGCG
AAATTCCGTT ATCGTCAAGA AGACACAGGC GTTACGATTC ATGTCAAGGC TGATAAAGTG
ACTGTTGACT TTGATGAACC TGTTCGCGCA ATCACCCCTG GACAAGCCGT TGTTTTCTAT
GATGGAGAAG AATGCCTTGG TGGAGCAATG ATTGACGTAG CTTACAAAGA ACAAAAAGTG
ATGCAATATC AATAA
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| Protein sequence | MDNTNTQLMS GKSPAQTRVV VGMSGGVDSS VTALLLKEQG YDVIGVFMKN WDDTDENGVC
TATEDYKDVA AVADQIGVPY YSVNFEKEYW DRVFEYFLAE YRAGRTPNPD VMCNKEIKFK
AFLDYAMELG ADYVATGHYA QVRTDEDGTV HMLRGADNNK DQTYFLSQLT QEQLKKTMFP
LGHLEKPEVR RIAEKAGLAT AKKKDSTGIC FIGEKNFKKF LGEYLPAQPG KMMTLDGVEM
GNHAGLMYYT IGQRGGLGIG GQHGQLTSDP WFVVGKDLTT NTLYVGQGFH HEHLYSTSLD
ASDLSFTREM PETFDLHCTA KFRYRQEDTG VTIHVKADKV TVDFDEPVRA ITPGQAVVFY
DGEECLGGAM IDVAYKEQKV MQYQ
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