Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0850 |
Symbol | |
ID | 4434280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 788306 |
End bp | 789145 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639666613 |
Product | transposase |
Protein accession | YP_808824 |
Protein GI | 116511608 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0138656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAACATC ATGGGAAGAT AAAAATTAAG CATGCAGTAA AAGTTCTTAA GGTTTCTCGC TCAGGTTTCT ATGAATACAT GCATCGTCGT CCTTCAAAAC AACAAGTGGA GAGAGAAATT CTCTCAGAGA AGATAAAAGC TGTCTTTCAT GAGCATAAGG GACGCTATGG TGCGGTTAGA ATTACCAAGG TACTTCATAA TACTGGTATT ATGACCAACA CGAAACGTGT TGGGAAACTG ATGCACTTGA TGGGACTTTA TGCCAAGGGA AGCCGTTATA AATATAAACA TTACAACAGA AAAGGAGCTT CGCTTTCAAG ACCCAATTTA ATTAATCAGA TCTTTAAAGC AACAGCTCCT AATAAAGTAT GGCTGGGAGA CATGACCTAT ATCCCTACCA AAGAAGGCAC CTTATACTTA GCCGTGAATA TCGACGTTTT TTCACGTAAG ATTGTAGGCT GGTCAATGTC TTCACGGATG CAAGATAAAC TGGTGAGGGA TTGCTTCTTA CAAGCTTGTG GGAAAGAACA TCCTCAGCCT GGCTTGATTG TCCATACTGA TCAAGGGAGT CAATATACAA GCTCTCGTTA TCAATCTACT CTTCGTCAAG TCGGTGCTCA ATCTAGCATG AGTCGTAAAG GAAATCCCTA TGACAATGCA ATGATGGAGT CTTTTTATAA GACGCTAAAG AGGGAGCTTA TTAATGATGC TCATTTTGAG ACAAGAGCTG AGGCTACTCA AGAAATATTT AAATACATTG AGACCTATTA CAATACAAAA AGGATGCATT CAGGTCTTGA TTACAAGTCT CCAAAAGACT TTGAAAAATA TAATTCTTAA
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Protein sequence | MKHHGKIKIK HAVKVLKVSR SGFYEYMHRR PSKQQVEREI LSEKIKAVFH EHKGRYGAVR ITKVLHNTGI MTNTKRVGKL MHLMGLYAKG SRYKYKHYNR KGASLSRPNL INQIFKATAP NKVWLGDMTY IPTKEGTLYL AVNIDVFSRK IVGWSMSSRM QDKLVRDCFL QACGKEHPQP GLIVHTDQGS QYTSSRYQST LRQVGAQSSM SRKGNPYDNA MMESFYKTLK RELINDAHFE TRAEATQEIF KYIETYYNTK RMHSGLDYKS PKDFEKYNS
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