Gene LACR_0814 details

Gene Information

• Locus tag: LACR_0814
• Symbol: nusA
• ID: 4433117
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactococcus lactis subsp. cremoris SK11
• Kingdom: Bacteria
• Replicon accession: NC_008527
• Strand: +
• Start bp: 756760
• End bp: 757908
• Gene Length: 1149 bp
• Protein Length: 382 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 639666578
• Product: transcription elongation factor NusA
• Protein accession: YP_808789
• Protein GI: 116511573
• COG category: [K] Transcription
• COG ID: [COG0195] Transcription elongation factor
• TIGRFAM ID: [TIGR01953] transcription termination factor NusA

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.0015948
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAAAG AAATGCTGAA CGCCTTTGCA ATGTTAGAAG AGCAAAAAGG AATTAAATCT 
GAGATTGCTA TTGAAGCGAT TGAGCAAGCT ATCACAGCAG CTTACAAGCG TCAATATGGT 
CAAGCACAAA ATGTTAAAGT TATCTTTGAT GAAAAGAAAG GAAACTTTAA TGTTTATTCT 
ACTCGTGAAG TAGTAGATGA AGTTTTTGAT AGTCGTCTCG AAATTTCTCT TGAAGATGCT 
CATGAATTAA ATCCTCATTA TGAAATTGGG GACAAAATCA TGTTTGAAGA AAAACCAAAA 
GATTTTGCTC GTACTGCTGC AGGGGCTGCT AAACAAGTCA TCATGCAAAA AATGCGTGAA 
GAAGAACGCA CAATCATTTA CAACGAATAT AGCCGTTACA AGGACGAAAT TATCCAAGGG 
ACTGTTGAAA AAGTTGATGC ACGTGCCGTT TATGTAAATC TTGGACGTGT TGATGCACTT 
TTGACTAAGA AAGACCAAAT TCCACAAGAA AACTTCCATG TGGATGACCG TGTGAAGGTT 
TATGTGACTG ATGTTGTCTT GACTCCAAAA GGAACTCGTG TCTTTATTTC TCGTACTGTG 
CCTGATATGC TCAAACGCAT GTTTGAAAAA GAAATTCCTG AAGTTTTTGA TGGAACTGTT 
GAAATCAAAT CTATTGCTCG TGATGCTGGT GACCGTGCGA AGGTCATCGT TCAAAGTCAT 
GATGAAAATG TTGATGCGAT TGGTACAATG GTTGGGGCTA AAGGTTCACG TATTCAAGGA 
ATTATTCGCG AACTTGCTGG CGAAAAAATG GATATCATTG AATGGTCAGA AGACAAAGCA 
ACTCTTGTAG CTAATGCTTT GAAACCTGCT CGTATTGAAC AAGTTTTGAT TACTGCTGAT 
GGTTCAAGTC TGGCTGTTGT TGCTCGTGAC CAATTGTCAC TTGCCATTGG TAAACGCGGA 
CAAAATGTTC GTCTTGCTGC TCACGTCACA AATAGCAAGA TTGATATTAA AGCTGCTGAC 
GAGTTTAACA TGGACGATTA TGAATTTGTT GGTGAAGCTG ACGAAGAAAC TCCAACTCTT 
GAAGTTGAGG AAACAATCTC AGTTGATGAA GTTGTTGAAG AACCAGTAGT TAGCGAAAGT 
GAAGAATAA 

 

Protein sequence

MSKEMLNAFA MLEEQKGIKS EIAIEAIEQA ITAAYKRQYG QAQNVKVIFD EKKGNFNVYS 
TREVVDEVFD SRLEISLEDA HELNPHYEIG DKIMFEEKPK DFARTAAGAA KQVIMQKMRE 
EERTIIYNEY SRYKDEIIQG TVEKVDARAV YVNLGRVDAL LTKKDQIPQE NFHVDDRVKV 
YVTDVVLTPK GTRVFISRTV PDMLKRMFEK EIPEVFDGTV EIKSIARDAG DRAKVIVQSH 
DENVDAIGTM VGAKGSRIQG IIRELAGEKM DIIEWSEDKA TLVANALKPA RIEQVLITAD 
GSSLAVVARD QLSLAIGKRG QNVRLAAHVT NSKIDIKAAD EFNMDDYEFV GEADEETPTL 
EVEETISVDE VVEEPVVSES EE