| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_0788 |
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| Symbol | |
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| ID | 4432347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | + |
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| Start bp | 733430 |
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| End bp | 735394 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639666556 |
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| Product | signal protein |
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| Protein accession | YP_808767 |
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| Protein GI | 116511551 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3887] Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0653759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTTG TCCGTCGGTT TTCACCGCTT GCTATTATTG TCATAATGGT TATTGTTCAA
ATCATTGAAA CCATAGTTGT CCATGCTTCA GCAACTCGTT GGTCAATCTT GGTTTATTTG
TTGATTTTGA ATATTGTGAT TACGCTCATC TTACTATCTC AAACCCGAAA TTATCAGTTG
CGCCGTCAAG ATTTTATTCG TAAAATCAAT GATGAAGCAG AAAATTCACT CAATGCTACT
TTGGATAATA TGCCAATTGG AGTCATTCGT TTCAATAATG AAACCTTCGA GCCTGAATGG
TTTAATCCCT TTATTGATAT GATTTTCAAA GGGAATGACA AAGTAATTAA TCGTGATGAT
ATTAAAAAAA TATTAAAAAA TGCAAGTGAT GACCAATATA TCACTATTGG TAAGCAAAAG
TATGTTGCAG AACTTGATTC TGATAAAAAC CTTATTTATT TAATTGATGC CACAAAAGAA
GTTGCTTTTA AATCAGAATT TAATGACAGT CGTGCAGTTA TTGGTGCGAT TTCAGTTGAT
AATTATGATG ATGCAACTGA TTTGATTACT GATAGTGGTC GAACAGCGAT TAATAGTTTT
ATCGCGTCAT TTTTAGAAGA ATTTGCTGAC AAGTATGGAA TTTATCTCCG TCGAATAAAC
AGCAGTCGTC ATTATTTTTT CTGTGATTAT CGTATTCTTG AAAAAATGAT TAATGATAAA
TTCGCTGTTC TCAAAGAATT TAGAGAACTT TCAGCTCAAA AAGAAATTCC ATTGACACTC
TCTATCGGTG TGGCTTATGG TTGGAATGAT TTTCCTACTA TCGGAAAAGT TGCCCTCAAT
AACCTTGAGT TGGCTCAAGT ACGCGGTGGT GACCAGGTTG TTTTGCGTGA AAATACACCG
CAAGCTCGTC CAGTTTATTT TGGGGGAAAT TCAGAAAGTA GAACTCAAAA AAGTAGAACA
AGAGCACGGG CTATCTCAAC TGCCCTTCGG ACAATCATTG CTGAGTCAGA AGATGTTTTT
ATCGTGGGTC ATCGATTTAC AGATATGGAC GCTTTAGGGG CAGCAGTGGC AATGAAAGCT
TTTGCTAATA TGTCAGGGAA AGAAGCCTTT GTGGTTTATG ACCCTGAGCA ATTATTGCCA
GATGTTGAAC GTGCAATTAA TAAAATGAAT GAATCTTCTG ATGGATTTAC ACATATCGTT
CGATTAGAAA CCGCTCAAAA GCTCAAGAAA AAAGATTCGT TACTTATTAT GGTTGACCAC
TCTAAAACCA GTCAAACCTT AAATCTAGAT TTTTATAAAT CTTTTGAAAA ATTAGTGGTG
ATTGACCACC ATAGACGTGA TGATGATTTT CCAGAACATG CCCTACTTTC ATATATTGAA
TCATCAGCAA GTTCTGCCAG TGAATTGACA GTTGAAATTC TGCAATTTCA TGATAATAAT
CAAAGAAAAA TGTCAACAAT TGAAGCAAGT ATTGTTCTTG CTGGGATTGA ACTGGACACA
AAAAACTTTA CAAAAGCAAC AACTAAAAGA ACCTTTGAAG CAGCGGCTTA TTTACGTTCA
AGAGGTTCAG ACAATGATCT GATTAAGATG ATTATGGCGA CTGATTTTGA AAAATACAAA
AAGACAAATG AAATCGTGCT TAATTCACAA ATGATTTTAC CTGGTATTGC TTTAGGGATT
GGACTTAAAC ATGAAAAATA TGATAATATA GCAACAGCTA AAGCCGCTGA TACTTTGCTA
GACATGGCGG GAATCACCGC AGCATTTACA ATTACTCAAC ATACAAATGG ATACATCTCA
ATCTCAGCCC GTTCTCGTAA TGGATTTAAT GTCCAAACAA TAATGGAACA AATGGGTGGT
GGTGGACATT TTAACAATGC CGCGACACAG ATTTATGAAA AGAATATCCA AAAAGTACAA
GATGATTTAA TTGAAATATT AAAAGAAAGA GAAAATGAAA AATGA
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| Protein sequence | MNFVRRFSPL AIIVIMVIVQ IIETIVVHAS ATRWSILVYL LILNIVITLI LLSQTRNYQL
RRQDFIRKIN DEAENSLNAT LDNMPIGVIR FNNETFEPEW FNPFIDMIFK GNDKVINRDD
IKKILKNASD DQYITIGKQK YVAELDSDKN LIYLIDATKE VAFKSEFNDS RAVIGAISVD
NYDDATDLIT DSGRTAINSF IASFLEEFAD KYGIYLRRIN SSRHYFFCDY RILEKMINDK
FAVLKEFREL SAQKEIPLTL SIGVAYGWND FPTIGKVALN NLELAQVRGG DQVVLRENTP
QARPVYFGGN SESRTQKSRT RARAISTALR TIIAESEDVF IVGHRFTDMD ALGAAVAMKA
FANMSGKEAF VVYDPEQLLP DVERAINKMN ESSDGFTHIV RLETAQKLKK KDSLLIMVDH
SKTSQTLNLD FYKSFEKLVV IDHHRRDDDF PEHALLSYIE SSASSASELT VEILQFHDNN
QRKMSTIEAS IVLAGIELDT KNFTKATTKR TFEAAAYLRS RGSDNDLIKM IMATDFEKYK
KTNEIVLNSQ MILPGIALGI GLKHEKYDNI ATAKAADTLL DMAGITAAFT ITQHTNGYIS
ISARSRNGFN VQTIMEQMGG GGHFNNAATQ IYEKNIQKVQ DDLIEILKER ENEK
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