Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0780 |
Symbol | |
ID | 4432890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 726213 |
End bp | 727601 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639666549 |
Product | hypothetical protein |
Protein accession | YP_808760 |
Protein GI | 116511544 |
COG category | [R] General function prediction only [S] Function unknown |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily [COG4696] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.680411 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATAA AAGCAGTATT TTTTGATTTA GATGGAACCC TATTTACTTC AACCCGTGGA GTAGCAACGA GTACCCGCAA AGCCATACAA GAGCTTCGCC AAAAAGATAT TTTTGTTGGA ATTGCCACAG GACGTGGGCC TGCTTTTGTG ATGCCTTTGC TAGAGAATTT AGACTTAGAC TTTGCAGTCA CTTATAATGG TCAGTATATA TTCACCCCCA AAGAAGTCAT TTTCCAAAAT CCTTTAGAAC AAAAAACCTT AAAGAAATTA ATGGATTATG CGACAGAAAA TCATTCGGAC ATCTCTTTAG GGACAGCACA TGGTGTAAAC GGTTCAGGCT TGTTAAAGTT TGGAGAAACG CGGCTAGCAA GCTTTCTATC AGGAGTCTTG CCCTCTGGAA CATCCGGAGT CGCTAGAAAC AGTTTCAAAC ATGTCATTCG CCGCGTTTTA CCACAAAATT CAAAACTGGC GGATAACGAA GAAGAATTTA TATATCAGGC TATGATGGTA GCTACAAGAA ATGAAACAGC TCGTTTGCAA GAAGCCTTTC CAGAACTTTT GGTTACCAGA AGTAATCCCT ATTCTGTTGA TTTAATTTCG GAATCAGGAG GAAAATTACC AGGGATTCAG CGCTTAGGCG AACGTTTTGG TTTTAACTTA GAACAAGTGA TGTGTTTTGG TGATTCTGAA AATGATTTGA CAATGATTTC TGGTGTGGGT TATGGGATTG CTATGGGTAA TGCTGTAGCC GAGGTAAAAA AAGTTGCGAC TTATGTTACG GATACCAATA ACCAAGATGG AATTGCTAAA GCTCTTGCCT ACCATGGTTT AATTCATTAT TCAGTTGAAA AAGATTTTGT ATCAAAAGAT CAAAATTTCA ATAAAGTTAA AGATTTCCAT CGTCTAATGG ATGGCAAAAC ACAAGAAGTT CCAAGAGCTT TTCCGCCAAC AGAAGCAGGA TTCCGTGCTG ATTTTAAAGT TGAAGAGATT GTTGAGTTTC TCTATGCTTC CGCTGATGGA AATCAAGAAA AATTCACAGA ATTAGTCGAA AATTTACACC AAGCAGTGGA CAAAGCGGCA GATAAGGTCA AGTCGAAAGA ACACAAAGAA GACAGCTTAA CTGGGCAAGT AGATGCGATG ATTGATTTAC TTTATTTCAC TTATGGCTCG CTCGTCCTTT CTGGAATTGA CCCTTATGAA ATTTTTAATG CTGTCCATCA AGCAAATATG GGTAAAATTT TCCCAGATGG CCGTCCACAT TTTGACCCAG TGACCCATAA GGTCTTGAAG CCGGAAGATT GGGAAGAAAA ATTTGCTCCA GAAGGAAAAA TAAAAAAAGA GCTTGAACGG CAAAAAAGAG TCGCTGCGAA AAAACATAAA ACTAAATAA
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Protein sequence | MDIKAVFFDL DGTLFTSTRG VATSTRKAIQ ELRQKDIFVG IATGRGPAFV MPLLENLDLD FAVTYNGQYI FTPKEVIFQN PLEQKTLKKL MDYATENHSD ISLGTAHGVN GSGLLKFGET RLASFLSGVL PSGTSGVARN SFKHVIRRVL PQNSKLADNE EEFIYQAMMV ATRNETARLQ EAFPELLVTR SNPYSVDLIS ESGGKLPGIQ RLGERFGFNL EQVMCFGDSE NDLTMISGVG YGIAMGNAVA EVKKVATYVT DTNNQDGIAK ALAYHGLIHY SVEKDFVSKD QNFNKVKDFH RLMDGKTQEV PRAFPPTEAG FRADFKVEEI VEFLYASADG NQEKFTELVE NLHQAVDKAA DKVKSKEHKE DSLTGQVDAM IDLLYFTYGS LVLSGIDPYE IFNAVHQANM GKIFPDGRPH FDPVTHKVLK PEDWEEKFAP EGKIKKELER QKRVAAKKHK TK
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