Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0763 |
Symbol | |
ID | 4434131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 707440 |
End bp | 709002 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639666532 |
Product | ABC-type sugar transport system, periplasmic component |
Protein accession | YP_808743 |
Protein GI | 116511527 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.34388 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATC AAAAAATGGT TGTTGCAGCT GGAGCGGCTT CAATGCTCGC AGCACTTGCT TTACTTTCTG CTTGTGGAAA CTCAATCTCT AGTAAAGAGG GGAATTCAAG CAATAAAGAT TTTACAGTTG CAACAGTTCG TTGGGCTGAT TGGGGGAATG ATTATACTAA ATTTCCAAAT CAGTTAGCAA AAGAAGCTGG AATTAATGTG AAGTGGGATA CTTATCTTAA TACGGATTGG GGAGATAAGA AGTCAACATT GATGGCAGGA GGGAATTTAC CAGATGCTTT TATGGGTTCA ATCACCTTTA CAGACCAAGA AATTGCTCAA AATCAGTCTA ATTTCATTCC CTTGGAAAAA TATGTCAAGG ATATGCCTAA TTTGCAAAAG GCAATGAAGA AGAATCCGGC TTTAAAAGCC ATGATTACAA GTCCGGATGG TCATATTTGG TCTTTACCTA AAGAAGCCCC AATGCGTCCA ATCATTGCGA ATCAATTATT TATCAACAAA GCTTGGTTGG ATAAGCTGGG CTTACAAATG CCAACAACTT ATGACGAATT TGTGAAAGTT TTGGAAGCTT TTAAAACTAA AGACCCTAAT GGCAATGGGA AGGCAGATGA AATTCCTTAT GGAACAGGAA ATTTTGACCC CACTATGTCT TACACTTTAC CCTTGGGTGT TCTACGAGGA GCTGATAATT CAAATGAAAT GATGATGTTG AATGGAAAAC CAGCTTATAT CCGCTCGACT GATAATTTCA AAAAAGGGAT TGAGGCCATG CATGATGCCT ATACGAAAGG GTTGATTGAC CCAGAATTGT ACACGCTAGA CCCTACGCAA GCACAAGCAA AATTAATGGC CGATACTGAA ACAGTTGGTG TGTCAGTTGG TTGGACAGCT GATGCAACTT TTGGGAAAAA TGCTAAAGAT TATGTTGCAC TTCCTGCATT AAAAGGCCCT GATGGAAATC AATATGTGAT GTCTGACTCT GACCATTTTA ACCAAGGGCG AGATGAATTT ATGGTAACGA CTCATGCTAA AAATGTAAAA GCACTGATAA AGTGGGCTGA TAAATTTTAT ACTAACGATG CAGCCATTCA AAATTATTAT GGAGCTTTTG GAGTTGGGAC TGAAAAATCA GGTGAGGCTT ACAAAGTTTT AAAACCAACT GGGGATAACT CAGCAGACAC TCAAGCGTGT ATTAATTCTT TGCGAGATTT TGGGCCTAAA TCATGGGATA ACAGTTTGAA TGATAAGGTT ACTTTTGAAG CCCCTACAAA TGGTGATGCA CAAAAATTAA AAATGGATGC AGAGTTGAAA CAATATGCTC GACCTGCCTT TCCTTCGGTT ACTTATACAA ATGATGAATT ACAAAAAATT GCTCAAGTTT ATCCAGATTT GAGTTCGTAC ACAACACAAG AAACAGCAAA ATGGGTTACT AAAGGTGGGA TTGATAAAGA TTGGGAGGCT TATATTGCAA AATTAAATCA AATGGGCCTA AAAGACTATT TGAAAATACA AACGGACGCT TATGAACGTT ACCAAAAAGC TTTGAAAAAA TAG
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Protein sequence | MKNQKMVVAA GAASMLAALA LLSACGNSIS SKEGNSSNKD FTVATVRWAD WGNDYTKFPN QLAKEAGINV KWDTYLNTDW GDKKSTLMAG GNLPDAFMGS ITFTDQEIAQ NQSNFIPLEK YVKDMPNLQK AMKKNPALKA MITSPDGHIW SLPKEAPMRP IIANQLFINK AWLDKLGLQM PTTYDEFVKV LEAFKTKDPN GNGKADEIPY GTGNFDPTMS YTLPLGVLRG ADNSNEMMML NGKPAYIRST DNFKKGIEAM HDAYTKGLID PELYTLDPTQ AQAKLMADTE TVGVSVGWTA DATFGKNAKD YVALPALKGP DGNQYVMSDS DHFNQGRDEF MVTTHAKNVK ALIKWADKFY TNDAAIQNYY GAFGVGTEKS GEAYKVLKPT GDNSADTQAC INSLRDFGPK SWDNSLNDKV TFEAPTNGDA QKLKMDAELK QYARPAFPSV TYTNDELQKI AQVYPDLSSY TTQETAKWVT KGGIDKDWEA YIAKLNQMGL KDYLKIQTDA YERYQKALKK
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