Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0733 |
Symbol | |
ID | 4432814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 680140 |
End bp | 680994 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639666504 |
Product | transposase |
Protein accession | YP_808716 |
Protein GI | 116511500 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0117119 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTTATA ATAGCACACT TCCAAAAGTT TTTGTTTATT TACTGACAAC CATTGAGACG CTTTATCAAA CGAGTGTTTC CCTTGAGGTT CAAAACCGAA AGAACATCCA TCTCGCAACA TCAGATTGCT TAGTTATCGC TTGTTACCTA TGGGGCGTAC TGCATTTTAG TGAAACGCTT AAAGCTAAGC ACCAATTGGC TCAAAGTTTA TTTCCTAATT TCCTAGAATA TTCTCGCTTT GTCCGCCGTT GTAATGCCCT CTTACCGAGT ATCCAAGTCA TTCGCCAAGC ACTCGTCTTT AAAGAGGTTG AAGGAATGAG TGTATCCATT ATTGACAGCT TCCCCATTCC TTTGTGTCAG CCTATTCGTA ATTTCAGAAG CAAAGTTCTT GGAGATTATG CAAATGTTGG CTACAATGCT ACAAAGGGAC AGTACTTCTA TGGATGTAAA TGTCATGCTT TAGTCAGTGA ATCAGGCTAC GTCATAGACT ACACAATTAC TCCTGCTTCA ATGGCTGATA GTTCAATGAC CGAGGAAGTG TTGAGTCAAT TTGGGACACC AACAGTCCTT GGAGATATGG GATATCTAGG TCAGTCACTG CATGATAGGC TGGAATTAGA AGGAATTGAT CTAATGACAC CTGTCAGGAA GAACATGAAG CAAAAGAAAA TCCTTTTCCC TAATTTTTCA AAACGTAGAA AAGTGATTGA GCGAGTTTTC TCTTTTTTGA CAAATCTAGG AGCTGAACGT TGTAAAAGTC GTTCGCCTCA AGGTTTTCAA TTGAAATTAG AGATGATACT TTTAGCGTAT TCTTTACTGT TAAATCAGCT AAATCACTGG AACCAGAGAC TTTAA
|
Protein sequence | MTYNSTLPKV FVYLLTTIET LYQTSVSLEV QNRKNIHLAT SDCLVIACYL WGVLHFSETL KAKHQLAQSL FPNFLEYSRF VRRCNALLPS IQVIRQALVF KEVEGMSVSI IDSFPIPLCQ PIRNFRSKVL GDYANVGYNA TKGQYFYGCK CHALVSESGY VIDYTITPAS MADSSMTEEV LSQFGTPTVL GDMGYLGQSL HDRLELEGID LMTPVRKNMK QKKILFPNFS KRRKVIERVF SFLTNLGAER CKSRSPQGFQ LKLEMILLAY SLLLNQLNHW NQRL
|
| |