| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_0712 |
|---|
| Symbol | |
|---|
| ID | 4432943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | - |
|---|
| Start bp | 658161 |
|---|
| End bp | 659510 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639666484 |
|---|
| Product | branched-chain amino acid permease |
|---|
| Protein accession | YP_808696 |
|---|
| Protein GI | 116511480 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1114] Branched-chain amino acid permeases |
|---|
| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0751355 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGAGA AACTAGCTGG TAAAGACTAT CTTTTTATTG GATCAATGTT ATTTGGACTT
TTTTTCGGTG CTGGAAATTT AATTTTCCCT ATCCATATGG GTCAAGAAGC AGGTGCTGCT
ATCTCTCAAG CCAATTTTGG TTTTTTAGTT ACAGCAGTTG GATTTCCATT TTTAGGAATT
ATTGCATTAG GAATATCACA AAGTAATGGC GTCTTTGAAT TGGCTACCCG AGTCAATCGT
ATTTATGCCT ATATCTTTAC GATTTTACTT TATTTGGTCA TTGGTCCCTT TTTTGCACTG
CCACGTCTAG CAACAACTTC GTTCGAAATT GGAATTTCTC CATTTTTATC TAACAAACTT
CAAACCCCAC TTTTAGCACT CTTTAGTATC CTATTCTTTG GTACTGCTTG GTTTTTATCT
AGAAAACCCA CAAAACTATT GGATTATATT GGCAAATTTT TAAATCCACT TTTTCTAGTC
TTGTTAGGTT TAATCTTAAT CATCGCTTTT AGTCACCCTC TTGGATCCGT TCACCAAGCA
GAGGTTGGTA AACTTTATCA AAATTCTGCT TTTATGAATG GTTTTACTCA GGGCTACAAT
ACACTTGATG CATTAGCAGC CTTAGCTTTC GGAATTATTA TTATCACAAC GATTCGTCAG
CGGGGAGTTA AAAATCCCAA AATTATTGCT AAGGAAACCA TTAAAGCCGG TTTGATTAGC
GTAGGACTTA TGGCTATAAT TTATACTTGC CTCTCTTACT TAGGAGCCAT GAGCGTAGGA
AAATTTGCGA TAAGTGAAAA TGGTGGAATT GCCCTTGCCC AAATTTCCAA TTACTATCTT
GGAACTTTTG GAATGATTAT CTTGGCTTTG ATTGTTATCA TTGCCTGTTT AAAAACTGCT
GTTGGGTTGA TGTCTGCCTT CTCTGAAACC TTCGTAGAAT TATTTCCAAA AAGAGAATAT
CGCTTTTACT TAATGATCGT TAGTATCCTC CCTTGTATTT TTGCAAATAT CGGTTTAACA
AAAATCATAG AACTTTCTGT TCCAGTGCTT ATGTTTTTAT ATCCATTAGC AATCACACTT
ATCCTTTTAG CCTTATTAGG TCCAGTTTTT CAACATTCTA AACTTGTCTA TCAAATAACC
ACCGCCTTCA CACTTTTGGC TGCTATCGCC GACGGACTCA ATGCACTTCC AAATCCGCTA
AAATCACTTA AGCCTATCGC GGCCATTCTC AATTTTGCCA AAGACTTTCT CCCCTTCTTC
TCTCTTGGAA TGGGCTGGAT TCTCCCAGCA GTCCTTGGAT TTATAATCGG TTGTTTAGTC
CACTTTTTAA AAAGAATCAC AAATAAATAA
|
|---|
| Protein sequence | MKEKLAGKDY LFIGSMLFGL FFGAGNLIFP IHMGQEAGAA ISQANFGFLV TAVGFPFLGI
IALGISQSNG VFELATRVNR IYAYIFTILL YLVIGPFFAL PRLATTSFEI GISPFLSNKL
QTPLLALFSI LFFGTAWFLS RKPTKLLDYI GKFLNPLFLV LLGLILIIAF SHPLGSVHQA
EVGKLYQNSA FMNGFTQGYN TLDALAALAF GIIIITTIRQ RGVKNPKIIA KETIKAGLIS
VGLMAIIYTC LSYLGAMSVG KFAISENGGI ALAQISNYYL GTFGMIILAL IVIIACLKTA
VGLMSAFSET FVELFPKREY RFYLMIVSIL PCIFANIGLT KIIELSVPVL MFLYPLAITL
ILLALLGPVF QHSKLVYQIT TAFTLLAAIA DGLNALPNPL KSLKPIAAIL NFAKDFLPFF
SLGMGWILPA VLGFIIGCLV HFLKRITNK
|
|---|
| |