| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_0700 |
|---|
| Symbol | clpP |
|---|
| ID | 4432931 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | - |
|---|
| Start bp | 646746 |
|---|
| End bp | 647345 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639666473 |
|---|
| Product | ATP-dependent Clp protease proteolytic subunit |
|---|
| Protein accession | YP_808685 |
|---|
| Protein GI | 116511469 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
|---|
| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000807571 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTATT TAGTACCTAC CGTTATTGAA CAATCAAGCC GTGGTGAACG TGCTTATGAT
ATTTATTCAC GACTTTTAAA AGACCGTATT ATCATGCTGA CAGGACCTGT TGAAGATGGT
ATGGCAAATT CTATCATTGC CCAACTTCTT TTCTTGGATG CACAAGATAA TACTAAAGAC
ATTTATCTCT ATGTAAACAC CCCTGGTGGT TCTGTATCAG CTGGGCTCGC TATCGTGGAT
ACAATGAACT TTATCAAATC GGATGTCCTA ACTATCGTTA TGGGAATGGC TGCTTCTATG
GGAACAATCA TCGCCTCAAG CGGTACTAAG GGTAAACGAT TCATGTTACC AAATGCTGAA
TACCTCATTC ACCAACCAAT GGGTGGTGCA GGTCAAGGTA CTCAACAAAC TGATATGGCA
ATCGTCGCCG AACAACTTTT GAAAACACGT AAACGTTTGG AACAAATCCT TGCTGATAAT
TCTAATCGCT CACTTGAACA AATTCACAAA GATGCTGAAC GTGACCATTG GATGGATGCC
AAAGAAACTT TAGAATATGG TTTCATTGAT GAAATTATGG AAAATAATTC ATTAAAATAA
|
|---|
| Protein sequence | MGYLVPTVIE QSSRGERAYD IYSRLLKDRI IMLTGPVEDG MANSIIAQLL FLDAQDNTKD
IYLYVNTPGG SVSAGLAIVD TMNFIKSDVL TIVMGMAASM GTIIASSGTK GKRFMLPNAE
YLIHQPMGGA GQGTQQTDMA IVAEQLLKTR KRLEQILADN SNRSLEQIHK DAERDHWMDA
KETLEYGFID EIMENNSLK
|
|---|
| |