Gene LACR_0693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0693 
Symbol 
ID4433605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp634937 
End bp636154 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content39% 
IMG OID639666468 
Productmajor facilitator superfamily permease 
Protein accessionYP_808680 
Protein GI116511464 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.883245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATCACA CGAAAACAGT TAATTGGAAA AGGAATTTAT TTATAACATG GATTGGCTGC 
TTTTTTGTAG GTTCTTCATT TTCACTAGTG ATGCCCTTTT TGCCTTTGTA CATACAAGGA
TTGGGCGTAA GTGGTGGGAA TGTTGAACTT TACTCAGGGT TAGCTTTTTC TTTGCCAGCA
TTAGCTTCTG GTCTTGTTGC CCCGATTTGG GGACGTTTAG CTGATGAACA TGGTCGTAAA
GTGATGATGG TAAGAGCTAG TATCGTCATG ACTTTGACCA TGGGAGGAAT CGCATTTGTT
CCCAATGTTT GGTGGTTACT TGGCCTTCGC CTACTGATGG GATTTTTCTC AGGCTATATT
CCTAACTCGA CTGCCATGAT TGCCTCACAA GCTCCAAAAG ATAAATCAGG CTATGCACTT
GGAACCTTAG CTACTGCAAT GGTTTCTGGA ACATTGATTG GGCCATCACT TGGTGGATTA
TTAGCCGAGT GGTTTGGAAT GGCAAATGTC TTTTTGATTG TAGGGGCTTT ATTAGCACTA
GCAACTTTAC TGACTATCTT TTTTGTTCAT GAAAACTTTG AGCCGATTGC AAAAGGTGAA
ATGTTGTCTA GCAGGGAAAT TATCAATAAA GTAAGTAATA AACAAATTCT TTTTGGTTTA
TTGGTTACAA CATTTATTAT TCAAATCACC TCACAATCTA TTGAACCATT CGTTACTTTA
TATATTAAAA CGCTGACAAC AAGCACTAAT AATCTGATGT TTATTTCAGG TCTAATTGTC
TCTGCAGTGG GCTTATCAGC AATGATATCC TCAAGTTTTT TGGGTCGTTT AGGTGATAAA
TATGGGTCAC ATCGATTGAT CTTGATTGGT TTGGTTTTCA CATTTGTTAT TTACTTGCCA
ATGGCTTTTG TGCAAAGTCC ATTACAACTT GGAATTTTAA GATTCCTTCT TGGCTTTGGT
ACGGGGGCTT TGATGCCATC AGTAAATTCT CTACTTTCAA AAATTACGCC AAAAGAAGGA
GTTAGTCGAA TTTTTGCTTA TGCACAAATG TGCTCAAATC TCGGAATGGT CACCGGTCCC
TTGGTTGGTT CAGCCATTGC TGGGTACATT AGTTATCGAG CAGCCATTGT CGGGACAAGC
CTATTTGTCA TTGTCAATAT CATCTGGTCA TTTATTAACT TCCGAAAATA TTTACGGAAA
CGGAGTATTA TGGAATGA
 
Protein sequence
MNHTKTVNWK RNLFITWIGC FFVGSSFSLV MPFLPLYIQG LGVSGGNVEL YSGLAFSLPA 
LASGLVAPIW GRLADEHGRK VMMVRASIVM TLTMGGIAFV PNVWWLLGLR LLMGFFSGYI
PNSTAMIASQ APKDKSGYAL GTLATAMVSG TLIGPSLGGL LAEWFGMANV FLIVGALLAL
ATLLTIFFVH ENFEPIAKGE MLSSREIINK VSNKQILFGL LVTTFIIQIT SQSIEPFVTL
YIKTLTTSTN NLMFISGLIV SAVGLSAMIS SSFLGRLGDK YGSHRLILIG LVFTFVIYLP
MAFVQSPLQL GILRFLLGFG TGALMPSVNS LLSKITPKEG VSRIFAYAQM CSNLGMVTGP
LVGSAIAGYI SYRAAIVGTS LFVIVNIIWS FINFRKYLRK RSIME