Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0623 |
Symbol | |
ID | 4434095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 571003 |
End bp | 571761 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639666399 |
Product | rRNA methylase |
Protein accession | YP_808613 |
Protein GI | 116511397 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATCA TCAGTTCAAA AGATAATAAA AAAGTTAAAG AAGCAAGAAA ATTGCTGACA AAAAAATACC GCAAAAATTC ATATCTCATC GAAGGATTTC ATTTGTTGGA GGAAGCACTG AAAGCAGGTC ATTCAATAAA GCAAATTTTT GTTGAAGAAA ATAAGCTGGC TAAACTGACA GCAATGATTG GGTCTGAAAA ATCACTGACA GACTTATCTG TAAATCTGGT CAGTAAAGAT GTACTAAAAT CTTTAGCTGA CAGCGAAAGT CCACAAGGAC TGATTGCTGA AGTGGCAAAA ATTGAAGAAG TTATTGATTT TTCAGCATCA AAATTTTTAC TTTTAGAAAA TGTTCAAGAT CCAGGAAATG TCGGAACCAT GATTAGAACG GCTGATGCAG CCGGCTTTTC AGCTGTTATT TTACTTGGTG AAACGGCAGA CCTTTATAGT CCGAAGGTTA TGCGTTCAAT GCAAGGATCA AATTTTCATT TAGCGATTGC CCGCATGAAT GAAGAAGAAT GTTTTGCTGC GCTCAAACAA GCAAAAATTT CAATTTTGAC AACAACGCTA TCAGCAAATT CTGTATCTTA TAAAACTGTT GAGGAATCAT CTTTTGCTTT GGTCATGGGC AATGAAGGAG CTGGAGTATC AGACTTTGCC GTGGAATCTG CTGACAAGCT TGTTCATATT GACATGCCAG GACAAGCGGA ATCTTTAAAT GTGGCTGTAG CAGCTGGGAT TTTGATATTT TCATTGTAA
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Protein sequence | MEIISSKDNK KVKEARKLLT KKYRKNSYLI EGFHLLEEAL KAGHSIKQIF VEENKLAKLT AMIGSEKSLT DLSVNLVSKD VLKSLADSES PQGLIAEVAK IEEVIDFSAS KFLLLENVQD PGNVGTMIRT ADAAGFSAVI LLGETADLYS PKVMRSMQGS NFHLAIARMN EEECFAALKQ AKISILTTTL SANSVSYKTV EESSFALVMG NEGAGVSDFA VESADKLVHI DMPGQAESLN VAVAAGILIF SL
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