Gene LACR_0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0620 
Symbol 
ID4434092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp568657 
End bp569853 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content38% 
IMG OID639666396 
ProductD-3-phosphoglycerate dehydrogenase 
Protein accessionYP_808610 
Protein GI116511394 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTATC AGATTAAAAC AATAGGAAAT AATATTGACC AAGTTGCTCT GGATGAAGTT 
GGCGAACAAT TTGCTGTCAA TCGAGTACCA GAAAACAAAG CGGACGCTTT TATTTGTCGT
GCCCAACCTT TTCATGATTA TGAATTTTCA AAAGAACTGT TGGCCATTGG ACGTGCGGGG
GCTGGATTTA ATAATATCCC GATTGAAAAA TGCGCAAGCA AAGGAATTGT TGTATTTAAT
GCCCCTGGTG GGAATGCTAA TGCGGTCAAA GAGTTGGTCT TGTCAATGAT GATTTTTGGG
ACCCGTAATT TGAAACCTGC CAATAAATGG CTGACAGGAC AAAAAGGAAA TGATAAGGCC
ATTGACGTTG CAGTTGAAAA CGGGAAAAAA GCATTTTCTG GTTCAGAAAT TTCTGGAAAA
ACTTTAGGTG TGATTGGTCT TGGAAATATT GGCTCAAAAG TTGCTAATGA TGCACAGCGT
TTAGGGATGA AAGTGATTGG TTATGACCCA TATCTCTCAA TTGAGCATGC TTGGAATTTG
TCACATCATG TCAAACGGGT CAATGATTTG TCAGAAATTT TTGAGAAAGC AGATTATATT
ACGGTTCACA CGCCAGCGAC TGATGAAACA AAGGGAATGC TTAATTGGAA AAATTTATCA
AAATGTAAAA ATGGAGTGAT TTTGCTGAAT TATGCTCGAG ATGAGATTTC TGATAAAGAA
GCCATTCTTA AGGCGATTGA TGAAGGGATT GTTCGTTTCT TCGGCACCGA TTTTGGTTCT
GAAAAATTTT ATCATCACCC TCAAGTTTTT TTGACTCCTC ATTTAGGGGG CTCAACAGCA
GAAGCCAGCT TAAATTGTAC TCGGATGGCT CTTGATTCTG TTCAAACCTA TTTGAAAACG
GGTGAGATTA TTAATTCAGT CAACTTTCCG CGTGTTTTGC AAGAGTTAAA TACGCCTTAT
CGTGTGACCT TAATCAATAA AAATGTGCCA AACGTTGTGG CGCAAATTTC TATAGCAGTT
GCCGAAGAAA ATATTAATAT CGCTAACATT GTCAATCGTG GTCAAGGGGA TTTTGCTTAT
ACATTACTTG ATTTAGATGA AAAAGACGAA AGAAAATTGG CCGCTTTGGT TTCGCGTTTT
GAAGCTTCTG AAAATATTGT GCGTGTACGT TTAATTGAGA ATCCAAATTT ATTTTAA
 
Protein sequence
MTYQIKTIGN NIDQVALDEV GEQFAVNRVP ENKADAFICR AQPFHDYEFS KELLAIGRAG 
AGFNNIPIEK CASKGIVVFN APGGNANAVK ELVLSMMIFG TRNLKPANKW LTGQKGNDKA
IDVAVENGKK AFSGSEISGK TLGVIGLGNI GSKVANDAQR LGMKVIGYDP YLSIEHAWNL
SHHVKRVNDL SEIFEKADYI TVHTPATDET KGMLNWKNLS KCKNGVILLN YARDEISDKE
AILKAIDEGI VRFFGTDFGS EKFYHHPQVF LTPHLGGSTA EASLNCTRMA LDSVQTYLKT
GEIINSVNFP RVLQELNTPY RVTLINKNVP NVVAQISIAV AEENINIANI VNRGQGDFAY
TLLDLDEKDE RKLAALVSRF EASENIVRVR LIENPNLF