Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0584 |
Symbol | |
ID | 4433950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 541112 |
End bp | 541933 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 639666364 |
Product | amino acid ABC transporter periplasmic protein |
Protein accession | YP_808578 |
Protein GI | 116511362 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0380043 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAGA ACGTGAAGAA AATGACATTG GGATTAGTTG GTTTGGCTGC GGTAGCAACA TTAGCAGCTT GTGGAAATGG AAAATCGGCT ACTAATCAAG TGGATAAAGT AAAAAAAGCT GGTGTATTAA AAGTCGCTTT ATCCCCAGAT TATCCACCCT TTGAATTCCA AATTATTAAA GATGGTAAGA ATACTGTCGT GGGTTCTGAT GTGGATTTAG CTAATGCAAT TGGTAAAAAG TTAGGTGTTA AAGTTAAGAT TGAAAGTATG GACTTTAATA ATGTTTTAGC TAGTTTAAAT ACAGGAAAAG CAGATATTGC TATTTCAGGT ATTTCAAAAG AACCTAGTCG TGAAAAATCT GTTAATTTTT CTGATGTCTA TTATACAGCA AGCAATTATT TAGTAGTAAA AAAATCTGAT TTAGGTAAAT ATAGTTCAGT AGATGACTTT AAAGGAAAAA AAGTAGCCGC TCAAAAAGGT TCCATTCAAG AAGGAATTGT AACCAGTCAA TTTAAAGGAA CAACAGAGAT TGCTTTACCT CAAATCGGTG ATGAAATCAA TGAAGTTAAA GGTGGACAGG TTCAAGGAGC AGTTATTGAA AATTTGATTG CCAAAAGTTA TGTTGCGGCT AATTCAGATT TGGCGATTGC GAATGTTGAA GTTAAAACAC CAAAAGATAG TTATGGTTCA GCAGTTGCAC TCCCTAAAGG ATCAGATGAA TTAACAAAGG TTGTCAATTC TGTGATTAAA GAAGAATTAA AGAATGGACA AATTAATAAA GATATTCAAA AGAACTATAC TCTTTCTGAA AATAACAAAT AG
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Protein sequence | MNKNVKKMTL GLVGLAAVAT LAACGNGKSA TNQVDKVKKA GVLKVALSPD YPPFEFQIIK DGKNTVVGSD VDLANAIGKK LGVKVKIESM DFNNVLASLN TGKADIAISG ISKEPSREKS VNFSDVYYTA SNYLVVKKSD LGKYSSVDDF KGKKVAAQKG SIQEGIVTSQ FKGTTEIALP QIGDEINEVK GGQVQGAVIE NLIAKSYVAA NSDLAIANVE VKTPKDSYGS AVALPKGSDE LTKVVNSVIK EELKNGQINK DIQKNYTLSE NNK
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