Gene LACR_0579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0579 
Symbol 
ID4433945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp535663 
End bp536133 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content38% 
IMG OID639666359 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_808573 
Protein GI116511357 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000125855 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAT CATCTGGTTG GGAACAATCT GTTTACGTTT TACTTATTTT GGCAAGACTT 
CCTGAAAATC GGACGATGTC ATCCATTGCA CTTGCTAATC GTCTCAAAGT TTCACCCTCT
TATCTCAAGA AAATAATCAA ATCGCTCGTT GATGAAGGAC TTTTACGCTC AACAACTGGA
AAAAATGGCG GCTTCTCTCT CAATAAAGAT CTTCTTGATA TTAGTTTTTA TGATGTCTTC
TTGGCCATTG AGGGCCGTGG ACGAATTTTT CAAAGTCAAG GACTCTTACA AAATTTTATT
GGTGCAGAAT CTGGTAAAGC ACAACATTGT GCGATTACAA CTGCGCTTGA TGAGATTGAA
AATACTCTTG TCAGAACCTT GTCAAATGTA TCGCTAGCGC AAGTTGCTGA CGAAACCCAA
TATAATTACA ATCTCGGCTA TCTTGATGAG TGGATTGACG AAATGGATTG A
 
Protein sequence
MKLSSGWEQS VYVLLILARL PENRTMSSIA LANRLKVSPS YLKKIIKSLV DEGLLRSTTG 
KNGGFSLNKD LLDISFYDVF LAIEGRGRIF QSQGLLQNFI GAESGKAQHC AITTALDEIE
NTLVRTLSNV SLAQVADETQ YNYNLGYLDE WIDEMD