Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0542 |
Symbol | |
ID | 4433660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 508551 |
End bp | 510422 |
Gene Length | 1872 bp |
Protein Length | 623 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639666325 |
Product | membrane carboxypeptidase (penicillin-binding protein) |
Protein accession | YP_808557 |
Protein GI | 116511341 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.158296 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGGTACA GTAAAATTTC TACTAAATCT AAGAAAAATA AACAAAATAA ATGGGCAAAA AGCGGTTCTG CTAAATCAAA ATGGTGGACA GCTGTTAAAT TATTTTTGAT TGTCTTCTTT TCATTAATTA TCTTGGTGCT AGCTGCCGGT GGCGCTGTTT TTGTTTATTA CGCCAAGGAT GCACCCGCTC TCAATTTAGA TAAGCTTGAA TCTACTCCTT CTCCTAAAGT TTACGACTCA AAAGAACACC TTGTTGCAAC TTTAGGGGCA GAGCAAAGAA ATTTAGTTAA AACAGACAAT ATTCCGGTTA TGCTGGTTAA TGCTGTTACT TCTATTGAAG ACCATCGTTT TTTCAACACA CGTGGAATTG ACCCGATACG AATTGCCGGT GCCTTCGTCA ACAACTTAAA AGGTGGTTCT TTAAACGGGG GTTCTACCCT TGATATGCAG TTGATTAAAC TTTCTTTTTT CTCAACAGAT GAATCGGACC AGACTTTGAG CGTCAAAGTT CAAGAAGCTT GGATGGCTCT AAAATTGGAC CAAAAATGGA CCAAAGAGCA AATTTTTACT GCTTATGTCA ATAAGGTAAA TATGGCAAAT GGGTATTACG GGATGGGAAC TGCTGCGCAA GCCTATTACG GAAAAGATTT AACAGAACTT TCAATTGCTC AACTGGCTCT TCTTGCCGGA ATGCCTCAAG CTCCTAATAC TTATAACCCT TACACTAATG CAACTTCTGT TAAATGGCGT CGTGACATGG TTATTCGCTC AATGCGTCGT TATAATAAAA TTACGGCTGA AGAAGAGAAA TCGGCGCTAG CTACTCCAAT TGATGATGGG CTTCAACCTT TGCAACAAAG CGTTACGATT CCTAGTTATG CTGATAACTT CCTCAAACAA GCTATAGCAC AAGCCAAGAC CTTAGCTGGT AATGATATTT TAAACGAAGG GGTTAAAATT TATACAATCC TTGATACTAC AGCACAACAA AATCTATATA ATATTGTTAA TAGCGGTAAT TATATTACCT ACCCAGATGA TACACTGCAA GTAGCTTCAA CGGTCACTGA TGTTAAAACT GGCGCTGTAA TCGCACAAAT CGGTGGACGT AATCAACCAA CCGATGTCAC TTTTGGTTTC AATCAGGCGG TTCAAACAGA CCGAGATTGG GGTTCAACGA TGAAACCAAT TGTTGACTAT GGCCCCGCTT TTGAAAATAA TATCTATACC TCAACGAATG ATTATGTTTC TGACTCCCCA ACGACTTATC CAAACGGAAC GCCTTTGAAA AACTGGGATA ATACCTATTT TGGTTCAATG ACTGTTAAGA GTGCATTGGC CCTTTCCAGA AATATTCCAG CTGTTAAAAC TTTAATTAAT GTTGGTTTAG ATAATTCTAG TAAATTTGTG GATGGTTTAG GTATTAATTT GAACCCGCTG CAATACTCCA ATGCTATCTC TAGTAATACT GATACAAAAA ATGGTGGGGC AAGTTCTGAG AAAATGGCTG CGGCTTACGC TGCTTTCTCA AATGGTGGTA TCTACACTAA ACCTTACTAT GTTTCTAAAG TTGTTTTCCC CGACGGGCGA ACAGTTGAAT ACAAACCAGT TCGTTCACGG GCAATGCAAG CTTCAACAGC TTATATTATG ACTAATATTC TCCAAAGTGT TTTAACATTA CCACTTTCTG AATCTGTCGG TTCATACGCT GCTGTTCCGG GCTTGCCTGC AGCTGGTAAA ACAGGGACTT CTAATTATAC TGATAGTGAA ATGGACCAAA TTACTGAAAA ATACGGCTCA CTCCCTGGAA TGATTTCTCC TGATGAAAAC TTCGTTGGTT ATACTCCTCA GGGTTCTGTT GCAAAGTTTT AA
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Protein sequence | MRYSKISTKS KKNKQNKWAK SGSAKSKWWT AVKLFLIVFF SLIILVLAAG GAVFVYYAKD APALNLDKLE STPSPKVYDS KEHLVATLGA EQRNLVKTDN IPVMLVNAVT SIEDHRFFNT RGIDPIRIAG AFVNNLKGGS LNGGSTLDMQ LIKLSFFSTD ESDQTLSVKV QEAWMALKLD QKWTKEQIFT AYVNKVNMAN GYYGMGTAAQ AYYGKDLTEL SIAQLALLAG MPQAPNTYNP YTNATSVKWR RDMVIRSMRR YNKITAEEEK SALATPIDDG LQPLQQSVTI PSYADNFLKQ AIAQAKTLAG NDILNEGVKI YTILDTTAQQ NLYNIVNSGN YITYPDDTLQ VASTVTDVKT GAVIAQIGGR NQPTDVTFGF NQAVQTDRDW GSTMKPIVDY GPAFENNIYT STNDYVSDSP TTYPNGTPLK NWDNTYFGSM TVKSALALSR NIPAVKTLIN VGLDNSSKFV DGLGINLNPL QYSNAISSNT DTKNGGASSE KMAAAYAAFS NGGIYTKPYY VSKVVFPDGR TVEYKPVRSR AMQASTAYIM TNILQSVLTL PLSESVGSYA AVPGLPAAGK TGTSNYTDSE MDQITEKYGS LPGMISPDEN FVGYTPQGSV AKF
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