Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0530 |
Symbol | |
ID | 4433648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 498015 |
End bp | 498824 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 639666314 |
Product | ABC transporter ATP-binding protein |
Protein accession | YP_808546 |
Protein GI | 116511330 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAA AAAATATAGA AAAATCCTAT GGTAAAAATC AAGTGCTAAA AAATATTAGC TTTGAACTAA ATCAAGGAGA AAAAGTTGCT TTGTTGGGCA ATAATGGTGC TGGAAAATCA ACATTGATGA ATATCATTAA TGGTAATCTT GAGGCTTCAT CGGGACAAAT TGATTATGGA ACAATGAATC TGACATCAAA TAATACAGGT TATATCATGC AAAATATGAC CCTACCTCCT GATGCTTTAG GAAATGAAGT TTTATCTCTA TTTGCGCGTG ATGAGAATGC TAAGAATTAT GGGAGAAGAT TAGTTAAAGA ATTCAGAATG GAATCATTTT TGAATCGAAG ATTTTCTAAT CTTTCTGGAG GACAGAAGCA AAAACTATTT TTGATTTCAG CTCTTCAAAA TAGTCCAGAA TATTTTTTCT TAGATGAAAT TACAACTGGG TTAGACAGTG AAAGTAGAGT AGAACTTTTT AAATTTTTAA CATCAAATTT GAAAGTGAAG GAAGCCACTT TACTTTTAGT GACACATTAT TTGGAGGAAG CTTTACAATT ATGTGATCGT TTCATTATTC TTAAAGAGGG TCAAATTATT GCGGATTTGA AAAAATCAGA TTTGATTCAG GAAGACTTTT CATATTTAGA GTGCTCAATG AATATTTCAG ATTTTGAAGA ATATAGGATT AAAGAATATC AATATAAAAT CCCTAAAAAA TTAGCTGCTG AAGCACTCGT TAGATTTAGT AAGGAAATTG TCTTATATCA AAAAGACTAT CGAATTGATT TGGAGGAATT ATTGTCATGA
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Protein sequence | MKIKNIEKSY GKNQVLKNIS FELNQGEKVA LLGNNGAGKS TLMNIINGNL EASSGQIDYG TMNLTSNNTG YIMQNMTLPP DALGNEVLSL FARDENAKNY GRRLVKEFRM ESFLNRRFSN LSGGQKQKLF LISALQNSPE YFFLDEITTG LDSESRVELF KFLTSNLKVK EATLLLVTHY LEEALQLCDR FIILKEGQII ADLKKSDLIQ EDFSYLECSM NISDFEEYRI KEYQYKIPKK LAAEALVRFS KEIVLYQKDY RIDLEELLS
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