Gene LACR_0462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0462 
Symbol 
ID4433004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp433672 
End bp435012 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content37% 
IMG OID639666253 
Productsuperfamily II DNA/RNA helicase 
Protein accessionYP_808487 
Protein GI116511271 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTA CAGACTTTAA TTTTAAAGAT TATATCAACC AAACTTTAGA GAATATCAAA 
TTTGAAAAAC CTACTGAAGT ACAACAAAAA TTGATTCCTA TTGTCCTTTC TGGACGTGAT
TTGGTAGGGG AATCTAAAAC AGGTTCTGGT AAAACGCATA CCTTTTTATT GCCAATTTTC
CAGAATATTA ATCCTGAACT TGATGAAGTG CAAGCAGTCA TCACGGCACC TTCTCGCGAA
TTAGCGACAC AAATCTACAA AGCTGCTCAA GAATTTGTGA AAGTAAATGG CAAAATTCGC
GTTTCAAACT TTGTCGGTGG AACAGATAAA GCCCGCCAAA TTAAAAAATT AGAAGCAGCA
CAGCCACATA TCGTTATTGG GACACCAGGT CGGATCCATG ATTTAGTTAA GTCTAATGCC
TTGGTTGTTC ATACAGCAAG GACATTTGTT GTCGATGAGG CGGATATGAC ACTTGACATG
GGCTTTTTGG CAGATGTTGA CCAAATTGCT TCAAGCTTTG GTAAACGTGT GCAAATGCTA
GTCTTTTCAG CAACAATTCC TCAAAAACTG CAACCTTTCT TGAAAAAATA TTTGCATAAT
CCAGTCATGG AAAAAATTGC AAATAAAACA GTCATTTCAG ATACCATTGA AAACTGGTTA
GTTTCAACAA AAGGAAGTTC ACATAATCAA CTTTTACTTC AATTGACTAA AGCACTCAAT
CCTTATATGG CAATGATTTT TGCTAATACA AAAGGACGTG TTGATGATAT TCATCATTTC
TTGACAAGTA ATGGTCTTAA AGTGGCAAAA ATTCATGGTG ACGTGCCACC ACGTGAGCGT
AAACGTATCA TGAATTCAAT TAAAAATCTT GATTATCAAT ATGTTGTTGC GACTGATATT
GCAGCGCGTG GAATTGATAT CGAAGGAGTT TCACATATTA TCAATGATGA AATTCCAAAA
GACTTGACTT TCTTTGTTCA CCGTGTTGGA CGTTCTGGAC GTAATGGATT ACGTGGTACA
GCGATTACAC TTTACAGCCC TTCTGATGAT TCAAGCATTC GTGAAATCGA AAAAATGGGT
GTAACTTTTC AACCTAAGGC TGTCAAAGAT GGCGAAATTG TAGATTCTTA TGATCGTGAC
CGTCGTGAAA AACGGACGAA AAAACAAGAT GAAATTTCAC TTGCTACTCG TGGAGCCTTG
GCTAAAGGAA AGAAAAAAGT CAAACCAGGC TATAAACGTG CTATTAAATG GCAAATTGAA
GAAGAAAACA AAAAGAATCG TCGTGCAGAG CGCAATAAAA ATGCCCGTAA AACACGTGAT
TCTCGTAAGC AAAGTTTCTA A
 
Protein sequence
MKFTDFNFKD YINQTLENIK FEKPTEVQQK LIPIVLSGRD LVGESKTGSG KTHTFLLPIF 
QNINPELDEV QAVITAPSRE LATQIYKAAQ EFVKVNGKIR VSNFVGGTDK ARQIKKLEAA
QPHIVIGTPG RIHDLVKSNA LVVHTARTFV VDEADMTLDM GFLADVDQIA SSFGKRVQML
VFSATIPQKL QPFLKKYLHN PVMEKIANKT VISDTIENWL VSTKGSSHNQ LLLQLTKALN
PYMAMIFANT KGRVDDIHHF LTSNGLKVAK IHGDVPPRER KRIMNSIKNL DYQYVVATDI
AARGIDIEGV SHIINDEIPK DLTFFVHRVG RSGRNGLRGT AITLYSPSDD SSIREIEKMG
VTFQPKAVKD GEIVDSYDRD RREKRTKKQD EISLATRGAL AKGKKKVKPG YKRAIKWQIE
EENKKNRRAE RNKNARKTRD SRKQSF