| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_0451 |
|---|
| Symbol | |
|---|
| ID | 4433045 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | - |
|---|
| Start bp | 421420 |
|---|
| End bp | 422229 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639666243 |
|---|
| Product | ABC-type multidrug transport system, permease component |
|---|
| Protein accession | YP_808477 |
|---|
| Protein GI | 116511261 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
|---|
| TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0034336 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACACAA CTGTAATTAA CAAAAATACT ACAACGATGA AAACAATCAG TTTAAAATCT
TGGTTGACAG ATATTATCGT CATGGCCAAG CGTGAACTTC TCAAAGTCAA ACATAGCCCA
GAAAAACTAT TTGATGTGAC CGTCATGCCA ATTATCATGA TCATCGTTTT CTCCCAACTT
TTTGGTGGAG CAATCATGGG AAATGTCAAA GCTTATCTCC CTTTTTTTGT TCCCGGAATT
TTAATCCAAA CACTTGTTAT GGCATCTGGC GCTGCTGGAA CCCAACTTCG TGAGGATTTG
GACAAGGGAG CTACAGACCG CTTCAATTCT TTGCCAATTT CACAAATTGC ACCCTTAGCG
GGAACGTTAA TCTCGGATAT TATCCGTTAT ATTATTGCCG CTGTCTTTGC ATTAGGCACA
GGTGCAGCTC TCGGTTGGCG AGCAAGCGCC GGATTTGGTT GGCTGCTTGT TGCAATTGGC
CTTGCAATCG TTACAACTTG GGCGCTCAGT TGGCTCTTTG CTTTAGTTGG TGTCCTTGCC
AAAAGTGCAG CAACTGTGAC AACCATTTCG AGCTTTTTGA CCATGTTTTT GGCCTTTTTG
TCAAATGCTT ATATTCCCGT CACTTCTTTA CCAAAATGGC TGAAAGTCAT TGCCGAAAAT
AATCCTGTTT CTCATTTGAT TACTGCCTTT AAAGAAGTGG CATATAATGG TAATTTTGGT
CATGAAGCCT GGTTGGTTCT TCTAATCAGC CTTCTGATTG TTCTCATTTT AGCACCCGTT
ACCGTTCTTG CTTATTCAAA GAAAAACTAA
|
|---|
| Protein sequence | MDTTVINKNT TTMKTISLKS WLTDIIVMAK RELLKVKHSP EKLFDVTVMP IIMIIVFSQL
FGGAIMGNVK AYLPFFVPGI LIQTLVMASG AAGTQLREDL DKGATDRFNS LPISQIAPLA
GTLISDIIRY IIAAVFALGT GAALGWRASA GFGWLLVAIG LAIVTTWALS WLFALVGVLA
KSAATVTTIS SFLTMFLAFL SNAYIPVTSL PKWLKVIAEN NPVSHLITAF KEVAYNGNFG
HEAWLVLLIS LLIVLILAPV TVLAYSKKN
|
|---|
| |