| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_0410 |
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| Symbol | |
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| ID | 4433345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | + |
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| Start bp | 381158 |
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| End bp | 382039 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639666205 |
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| Product | pseudouridylate synthase, 23S RNA-specific |
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| Protein accession | YP_808439 |
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| Protein GI | 116511223 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTTTG CTTTTAGAAA CGAGATTGAA GGAAGCATGG TCAAATCAAT GCTAGGCCGT
CAGGGTATTT CTAGGAGATT ACTGACAAAA GTTAAATTTG ATGGTGGAAA AATTATGGTG
AATGGTATTG AAAAAACTGC TATTTACCAT CTGGAAAAAG GTGATTTAGT TACGATTACG
GTACCTGATG AACCAGATAA CGAAAAATTA ATTCCTGACG ATGTTCCACT TAATGTTTTG
TTTGAAGATG ACCACTATCT GGTTGTTGAA AAGCCAGCGG GAAAGGCTTC AATCACAGGG
TCTCTTCATC CGACAGGGGC AATGTCCAAT GCTGTCAAAG GATATATTTC TAGAAAAAAT
TATCCCAATC AAACCGTGCA TATTATTACT AGATTAGATC GTGATACCAG TGGAATTATG
TTTCTAGCCA AGCATCGCTA TGCTCATGCG TTAATGGTTC AGCATAAGTT TCGAGAGACT
TTAGAAAAAC GATATTACGC CATTATTAAT GATGGAGATT TGCCGGATTC TGGTCAAATT
GATTTACCGA TTGGACGCCG TGATGATTCG ATTATAGAGC GGCAAGTGCG TTTTGATGAA
AAATCAAAAA ATGCACTGAC GTCTTATGTT GTGACTGAGC GAAAAAATGA TTTAGCGCTT
CTTGATATTA TTTTACATAC AGGTCGAACG CATCAAATTC GTGTCCATTT TTCTCATCTT
GGCTATCCTT TAGTTGGTGA TGATTTATAC GGTGAAAATC ATGATTTGAT TTCACGTCAA
GCCCTTCATT GTCATCATTT ACAATTTTTA AATCCGTTTA CTGACGAAAT GGTTCATGTG
GAATTAGACA TGCCAGATGA TATGAAAAAC TTATTGAAAT AA
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| Protein sequence | MQFAFRNEIE GSMVKSMLGR QGISRRLLTK VKFDGGKIMV NGIEKTAIYH LEKGDLVTIT
VPDEPDNEKL IPDDVPLNVL FEDDHYLVVE KPAGKASITG SLHPTGAMSN AVKGYISRKN
YPNQTVHIIT RLDRDTSGIM FLAKHRYAHA LMVQHKFRET LEKRYYAIIN DGDLPDSGQI
DLPIGRRDDS IIERQVRFDE KSKNALTSYV VTERKNDLAL LDIILHTGRT HQIRVHFSHL
GYPLVGDDLY GENHDLISRQ ALHCHHLQFL NPFTDEMVHV ELDMPDDMKN LLK
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