| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_0395 |
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| Symbol | prfC |
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| ID | 4433844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | + |
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| Start bp | 364240 |
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| End bp | 365811 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639666190 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_808424 |
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| Protein GI | 116511208 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.118943 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTTAC AAGAAGAAAT AAAAAAACGT CGGACTTTTG CCATTATCAG TCACCCGGAT
GCCGGTAAGA CGACGATTAC AGAACAACTA TTGAAATTTG GGGGTGCCAT CCGTGAAGCT
GGTACTGTAA AAGCACGTAA AACAGGAAAT TTTGCCAAAT CAGACTGGAT GGACATTGAA
AAAGAACGTG GAATTTCTGT AACGAGTTCT GTCATGCAGT TTGACTATGC GGGAAAACGG
GTTAATATCT TGGACACGCC AGGGCATGAG GATTTCTCAG AAGATACTTA TCGAACGTTG
ATGGCAGTTG ATGCGGCAGT CATGGTTATT GATAGTGCTA AAGGGATTGA AGCACAGACG
AAAAAACTTT TCCAAGTTGT CAAACGTCGT GGAATTCCAG TTTTCACTTT CATCAATAAA
CTTGACCGTG ATGGACGTGA ACCACTTGAT TTGCTTTCTG AATTGGAAGA AATTCTTGGA
ATTGCCAGTG TACCAATGAA TTGGCCAATC GGCATGGGGA AAAATTTCCA AGGGCTTTAT
GATTTTACGC ATGGGCGCGT AGAAGTTTAT CAACCAGAAG ATGGAAAACG TTTTGTTGAA
TTTGATGAAA ATGGGGAAGT ACCAACAAGT CATCCTTTAA CGAAAAATCC ATTTTTCACG
CAAGCTTTAG AAGATGCTGA ATTACTTTTG GATGCAGGAA ATCAATTTTC AGAAGACGAA
GTAGTTGCTG GGCAATTGAC ACCAGTTTTC TTTGGGTCAG CTTTGACCAG TTTTGGGGTG
GAAACTTTCC TCGAAACATT TTTAGAATAC GCACCAGAAC CTCATTCACA CAAAACGGTT
GATGAAGAAG AAATTGAACC TTTAAATCCT GATTTTTCTG GTTTCATTTT CAAAATTCAA
GCGAATATGG ACCCTCGTCA CCGTGACCGA ATTGCTTTTG TCCGTATTGT TTCTGGCGAA
TTTGAGCGTG GAATGGATGT TAATCTTGTC CGCACGGGTA AAAAAGTAAA ATTATCTAAT
GTGACACAGT TCATGGCTGA ATCACGAGAA AATGTCGAAA ATGCTGTCGC TGGTGATATT
ATTGGGGTTT ATGATACCGG AACTTATCAA GTTGGTGATA CTTTGACAAC TGGTAAATTA
AAGAAATCAT TTGAGCCACT TCCAACGTTT ACACCGGAAC TTTTCATGCG TGTGCAAGCG
AAAAATGTCA TGAAACAAAA ATCATTCCAA AAAGGAATTG ACCAATTGGT TCAAGAGGGA
GCCATTCAGC TCTACAAATC TTATACGACT GGCGATATCA TGCTTGGTGC GGTTGGACAA
CTTCAATTTG AAGTCTTTAA AGACCGGATG GAGCGCGAAT ATAATTCGGA AACAATCATG
ACACCGATGG GCTCAAAAAC AGTGCGTTGG ATTAAAGAAG AAGATTTAGA TGAAAAAATG
TCAAGTTCGC GAAACATCTT GGCGCGAGAC CGTTTTGACC ATCCATTGTT CTTATTTGAA
AATGAATTTG CCATGCGCTG GTTCAAAGAT AAATATCCAG ATATTGAATT AATGGAACAA
TTTTCAGTAT AA
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| Protein sequence | MTLQEEIKKR RTFAIISHPD AGKTTITEQL LKFGGAIREA GTVKARKTGN FAKSDWMDIE
KERGISVTSS VMQFDYAGKR VNILDTPGHE DFSEDTYRTL MAVDAAVMVI DSAKGIEAQT
KKLFQVVKRR GIPVFTFINK LDRDGREPLD LLSELEEILG IASVPMNWPI GMGKNFQGLY
DFTHGRVEVY QPEDGKRFVE FDENGEVPTS HPLTKNPFFT QALEDAELLL DAGNQFSEDE
VVAGQLTPVF FGSALTSFGV ETFLETFLEY APEPHSHKTV DEEEIEPLNP DFSGFIFKIQ
ANMDPRHRDR IAFVRIVSGE FERGMDVNLV RTGKKVKLSN VTQFMAESRE NVENAVAGDI
IGVYDTGTYQ VGDTLTTGKL KKSFEPLPTF TPELFMRVQA KNVMKQKSFQ KGIDQLVQEG
AIQLYKSYTT GDIMLGAVGQ LQFEVFKDRM EREYNSETIM TPMGSKTVRW IKEEDLDEKM
SSSRNILARD RFDHPLFLFE NEFAMRWFKD KYPDIELMEQ FSV
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