Gene LACR_0394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0394 
Symbol 
ID4433843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp362908 
End bp363846 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content38% 
IMG OID639666189 
ProductABC-type oligopeptide transport system, ATPase component 
Protein accessionYP_808423 
Protein GI116511207 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAAC CTAAAAAAGT GGTTGAAATA AAAAACCTTG ATTTGACTTT TAATAAAGGA 
AAAAAAGGGG CAAATAAAGC AATTAATAAT GTTTCTTTAG ATATTTATGA AGGAGAAACA
TTTGGACTTG TTGGAGAATC AGGTTCTGGT AAAACAACGA TTGGTCGAGC AATTCTTAAA
CTTTACGATA ATTTTATTAC TGGTGGAGAA ATTCTCTTTG AAGGTAAAGA TGTTCGTAAT
CTAAAAGGCT CAGAGTTGCG AGAATATCGT TCAGAAGCAC AAATGATTTT CCAAGATCCA
CAAGCTTCAT TGAATGGGCG GATGCGCGTT AAAGATATTG TTGCTGAAGG ACTTGACGCT
AACGGTTTAG TAAAAACTAA AGCTGAACGT GATGCTCGTG TATTGGAACT TTTGCGTCTG
GTTGGATTGA ATGATGACCA TTTGACACGT TATCCCCATG AGTTTTCTGG TGGACAACGT
CAACGGATTG GGATTGCACG TGCACTTGCT GTAAAACCAA AATTTGTCGT TGCCGATGAA
CCTATCTCGG CACTAGATGT ATCAATTCAG GCCCAAGTCG TTAACTTGAT GAGAGATATT
CAAGCAAAAG AAAATTTGAC TTACTTATTT ATCGCTCATG ATTTGTCAAT GGTTAAATAC
ATTTCAGACC GCATTGGTGT GATGCATTGG GGGAAAATTT TGGAAGTTGG AACTTCTGAG
CAAGTTTACA ATCATCCAAT TCATCCTTAC ACTAAGAGTT TGCTAAGTTC GATTCCGTCA
CCAGACCCTA TCTCTGAACG TCAGCGGACC CCAATTGTTT ATGACCCAAC AGCAGAATTG
GATGGACAAG AACGTGAGAT GCGTGAAATT ACGCCTGGAC ATTTTGTCTT TTCAACAGAA
GCTGAAGCGG AAGTGTATAA GAAAAATGCC ACTCTATAA
 
Protein sequence
MTEPKKVVEI KNLDLTFNKG KKGANKAINN VSLDIYEGET FGLVGESGSG KTTIGRAILK 
LYDNFITGGE ILFEGKDVRN LKGSELREYR SEAQMIFQDP QASLNGRMRV KDIVAEGLDA
NGLVKTKAER DARVLELLRL VGLNDDHLTR YPHEFSGGQR QRIGIARALA VKPKFVVADE
PISALDVSIQ AQVVNLMRDI QAKENLTYLF IAHDLSMVKY ISDRIGVMHW GKILEVGTSE
QVYNHPIHPY TKSLLSSIPS PDPISERQRT PIVYDPTAEL DGQEREMREI TPGHFVFSTE
AEAEVYKKNA TL