Gene LACR_0392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0392 
Symbol 
ID4433841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand+ 
Start bp360825 
End bp361856 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content39% 
IMG OID639666187 
ProductABC-type dipeptide/oligopeptide/nickel transport system, permease component 
Protein accessionYP_808421 
Protein GI116511205 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATT TAAATAAAGA CTTCACCCTT GTTGGTTCAA AGGGTTCAGA TTCAACAGAA 
AAAATTGCGA AACCTGCCTT GAGTTTTTTC CAAGATGCTT GGCGTCGTTT TAAGAAAAAT 
AAAGTAGCTT TGGTTGCCAT GTGGATTATT GCGATTACAT TGGTTTTCTC AGTGATTTCA 
GCATTTGTTG TACCACAATC AAAGGCAAAT TACTTTAATC CAAATAAATC ACAAGTTTAT 
GGAAATCTTC CGCCAAAACT ATCAGGTGAT TTACCATTTT GGAATGGTGA ATTTAAAGCA 
CCGGGTTCTA CTGAAAGAAC AGATGTCTAT AAATCACAAG ATGTTCCAAG CAAAGACAAA 
TATGTCTTCG GGACTGATAA ATATGGTCGT TCATTAGCTA AACGAACAGT TGTTGGTTTG 
CGTATTTCAT TGATTATTGC CCTTGCTGCG GCTCTAATTG ACTTAGTAAT TGGGGTGACC 
TACGGGATTA TTTCCGGCTG GATGGGCGGA AAAGTCGATA TGGTCATGCA ACGGATTATT 
GAAATTATCC AATCTGTACC AAACTTAGTT GTGGTAACCA TGCTTGCCCT CTTATTGGGA 
CAAGGGATTT CATCAATTAT CATTGCCATT GGGCTCTTTG CTTGGACCGG AATGGCCCGG 
CAAGTCAGGA ATATGGTGCT CTCCTATAAA GAGCGTGACT TTGTCTTAGC TTCAAAAACT 
TTAGGACAAT CTACTTGGAA AATTGCAGTA AAACATTTGT TGCCAAACGT TTCAGGGGTT 
ATTGTTGTCC AAATCATGTT TGATATTCCA AGTATGATTA TGTATGAGGC TGTTTTATCA 
GCGATTAACC TTGGGGTTAA ACCGCCAACG TCTTCTTTGG GGACTTTGAT TAATGATGGG 
ATTGCAAGTT TGCAATTCTA TCCATTCCAA TTGATTATTC CAGCAGTAGT ATTGTCTGTG 
CTTTCACTCA CATTTATCTT CTTTGGAGAT GGTTTGCGTG ATGCATTTGA CCCTAGAGCA 
AGTGAGGATT AG
 
Protein sequence
MENLNKDFTL VGSKGSDSTE KIAKPALSFF QDAWRRFKKN KVALVAMWII AITLVFSVIS 
AFVVPQSKAN YFNPNKSQVY GNLPPKLSGD LPFWNGEFKA PGSTERTDVY KSQDVPSKDK 
YVFGTDKYGR SLAKRTVVGL RISLIIALAA ALIDLVIGVT YGIISGWMGG KVDMVMQRII 
EIIQSVPNLV VVTMLALLLG QGISSIIIAI GLFAWTGMAR QVRNMVLSYK ERDFVLASKT 
LGQSTWKIAV KHLLPNVSGV IVVQIMFDIP SMIMYEAVLS AINLGVKPPT SSLGTLINDG 
IASLQFYPFQ LIIPAVVLSV LSLTFIFFGD GLRDAFDPRA SED