| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_0387 |
|---|
| Symbol | ddl |
|---|
| ID | 4433819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | + |
|---|
| Start bp | 353362 |
|---|
| End bp | 354465 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639666182 |
|---|
| Product | D-alanyl-alanine synthetase A |
|---|
| Protein accession | YP_808416 |
|---|
| Protein GI | 116511200 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
|---|
| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.067468 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAGTA AAAAAGAAGC GACTGACAAG GCAGTCAGTA AAAAAGGAAG AAATATGTCA
AAAGAAACAT TAATTTTGTT GTATGGTGGT CGTTCTGCTG AGCGAGAAGT ATCAGTTTTA
TCAGCAGAAT CAGTGATGAG AGCTGTCAAT TATTCTCGTT TTATTGTGAA AACTTACTTT
ATCACTAAGG GTGGTGAATT CATAAAAACA CAAGAATTTA CTGACACACC TGCTGAAGAA
GAAAAATTAC TGACAAACGA TTTGGCAGAG TCTTATCCAA AGATTTCACC TGCGGCAATT
TATGAAAAAG ATGCTGTTGT ATTTCCAGTT CTACATGGTC CAATGGGTGA AGACGGCTCT
ATTCAAGGAT TTTTAGAAAT TTTGCGTTTG GCATATGTCG GACCGAATAT TTTATCTGCC
TCAAGTACAA TGGATAAATT ATTAGCAAAA CATGTTTTTG AAGCTGTTGG TGTGCCACAA
GTTCCTTATG TTGCCGCTTT TGCTGACGAA AATCAAGCGG AGATTGCTCA AGAAGTCGTC
GAAAAATTAG AATTTCCAGT TTTTGTTAAA CCTGCTAATA TGGGTTCTAG TGTGGGGATT
TCAAAAGTTG ATGATTTAGC AGATCTTCAA CCAGCCCTGA GTGAAGCTTA CAAATATGAT
AACCGTGTGG TCATTGAACA AGGGGTGGAT GCGCGTGAAA TCGAGTGTGC TGTCTTGGGA
AATAATAGTG ACGTTTCTGC AACACTTCCA GGAGAAGTCG TGAAAGATGT TGGATTTTAT
GATTACAACT CAAAATATAT TGATAATAAA ATCCAAATGG ACATTCCTGC AAAAGTTTCA
GCAGATTTAG CTCAAAAAAT TCAAGAATAT GCCAAGAAAG CTTATAAAGC AGTTAATGGA
GCTGGTTTGT CACGTTGTGA TTTCTTTGTG ACTAAAGATG GAAATGTGTA TCTTAATGAA
GTCAATGCCA TCCCTGGTTT CACTCAATGG TCAATGTATC CATTGCTTTG GGAAAATATG
GGCTTGTCTT ACTCTGATTT AATTGAAAAA TTAGTTGATT TAGCTAAAGA AACTTTTGAA
ACACGCGAAA ATCATCTCTT ATAA
|
|---|
| Protein sequence | MVSKKEATDK AVSKKGRNMS KETLILLYGG RSAEREVSVL SAESVMRAVN YSRFIVKTYF
ITKGGEFIKT QEFTDTPAEE EKLLTNDLAE SYPKISPAAI YEKDAVVFPV LHGPMGEDGS
IQGFLEILRL AYVGPNILSA SSTMDKLLAK HVFEAVGVPQ VPYVAAFADE NQAEIAQEVV
EKLEFPVFVK PANMGSSVGI SKVDDLADLQ PALSEAYKYD NRVVIEQGVD AREIECAVLG
NNSDVSATLP GEVVKDVGFY DYNSKYIDNK IQMDIPAKVS ADLAQKIQEY AKKAYKAVNG
AGLSRCDFFV TKDGNVYLNE VNAIPGFTQW SMYPLLWENM GLSYSDLIEK LVDLAKETFE
TRENHLL
|
|---|
| |