Gene LACR_0347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0347 
Symbol 
ID4434179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp316455 
End bp318449 
Gene Length1995 bp 
Protein Length664 aa 
Translation table11 
GC content37% 
IMG OID639666142 
ProductABC-type multidrug transport system, ATPase and permease component 
Protein accessionYP_808376 
Protein GI116511160 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATA CCAAATCAAC AAGAAAAATG TCTGACACCA CACGTGCCAT CCGATTTTTT 
TACCTCTATC TCAAAAGATA TAAACTCCAA TTTGCTGTGA TTATGATTTT CATCGTCGCA
GCAACATGGT TGCAGGTAAT TGCACCCTCA CTCTTAGGGG ATGCAATTAC AAATCTTGGG
GTTTATGTTA AAGACTTCTT TACACATCAA CATGCTGGAC AATCACAAGA TGCATTACAA
CAGATTGCTC AACAATTAAG CCAACAAATG CACCAAACCG TAGATTGGCA CAATGTTCCC
GAAGTCGTTA AAACATTACC ACAAGCAGCT CAGGACCAAA TTACAGCTCA TCTTCCTAAA
GGAACAACTT TAGAAACACT CAAAACAGTG GCAACTTCAC ATGCTTCTAG CACTTCTACA
TTCATGAAAG GAATGTGGCA ATTGCTTGCA GTCTATGTAG CAACAGGTGT GTCAATGTTG
ATTTATACCT TGCTCTTTAG CCGTATCGTT GCTCATTCAA CAAATCGCAT GCGTAAGGGT
TTGTTTGGTA AACTTGAACG TTTGACAATT TCATATTTTG ACCGTCATCA AGATGGAGAT
ATCCTTGCTC GTTTCACCTC TGACTTGGAT AACATTCAAA ATACATTGAA CCAAGCACTC
GTTTCAGTGA TTTCAAATGC TGCCGTTTTT GTCGGAGTAA TCATCCAAAT CTTCCTTAAA
GATGTAACTT TTGCTTGGTT GACAGTGGCG GCTTCACCAG TTGCCATTTT ATCTGCAGTT
ATCATTATTC GTCAATCGAA AAAAGCAACA GATAAACAAC AAGAAGAAGT TTCACAACTC
AATGCCTATA TGGATGAAAA AATCTCTGGG CAAAAAGCAA TTATCGTTGA AGGTTTACAA
GAAGATTCTA TTGATGGTTT CTTGAAACAT AACGAAAATG TTAAAAAACG TACTTTTGCT
GCTCAAGCAT GGTCTGGTAT GATTTTCCCA TTGATGAATG GTTTCCAACT TTTGTCAATT
GCCATCGTTA TCTTTGGTGG TACAGCCTAT GTTCTCAACA ACGATAGTAT GTCAATCACT
ACAGGTTTGG GTCTCTTAGT TGCCTTTGTT CAATATGTTC AAAGTTACTA CAACCCAATC
ATGCAAATTT CATCAAACTT TGGTCAACTT CAGCTTGCCA TTACAGGTGC AACTCGTCTG
AATGTTATGT TTGATGAACC AGAAGAAGTT CGTCCTGAAA ATGGTAGGAA ATTTGACACG
ATTAAAGATG GTATTCAAAT CGAAAATCTT GATTTTGAAT ATCTTCCAGG TAAACCAGTC
CTCAAAAAAG TTAATATTGA TGTTAAAAAA GGACAAATGG TTGCCCTCGT TGGTCCAACT
GGTTCAGGTA AAACAACTGT CATGAACTTG ATGAACCGTT TCTATGATGT CAATGGTGGA
GCAATCAAGT TTGATGGAAC AGATATTCGT GAATTTGATT TAGATAGTTT ACGTTCAAAT
GTTGGGATTG TACTTCAAGA GTCTGTACTC TTTGATGGAA CAATTGCCGA TAACATCAAG
TTTGGTAAAC CAAATGCCAC TCAAGAAGAA ATTGAAACAG TTGCGAAGAC AACACATATA
CATGAATTTA TCGAAAGCTT GCCTGACAAG TATGAAACAC ACGTTTCTGA TGATGAATCA
GTCTTCTCAG TTGGTCAAAA ACAACAAATC TCTATTGCAC GTACTATTTT GACAAATCCA
GAACTTTTGA TTTTGGACGA AGCAACATCG AACGTGGATA CCGTAACAGA AGAACAAATT
CAATGGGCAA TGGAAGCAGC CATTGCTGGA CGAACTTCAT TCGTTATTGC TCACCGTTTG
AAAACAATTC TTAATGCAGA TAAGATTGTT GTTCTTAAAG ATGGTGAGGT CATTGAAGAA
GGAAATCATC ATGAACTCGT TGCTCAAGGT GGATTCTACT CTGAACTTTA TCATAATCAA
TTCGTTTTTG AATAA
 
Protein sequence
MENTKSTRKM SDTTRAIRFF YLYLKRYKLQ FAVIMIFIVA ATWLQVIAPS LLGDAITNLG 
VYVKDFFTHQ HAGQSQDALQ QIAQQLSQQM HQTVDWHNVP EVVKTLPQAA QDQITAHLPK
GTTLETLKTV ATSHASSTST FMKGMWQLLA VYVATGVSML IYTLLFSRIV AHSTNRMRKG
LFGKLERLTI SYFDRHQDGD ILARFTSDLD NIQNTLNQAL VSVISNAAVF VGVIIQIFLK
DVTFAWLTVA ASPVAILSAV IIIRQSKKAT DKQQEEVSQL NAYMDEKISG QKAIIVEGLQ
EDSIDGFLKH NENVKKRTFA AQAWSGMIFP LMNGFQLLSI AIVIFGGTAY VLNNDSMSIT
TGLGLLVAFV QYVQSYYNPI MQISSNFGQL QLAITGATRL NVMFDEPEEV RPENGRKFDT
IKDGIQIENL DFEYLPGKPV LKKVNIDVKK GQMVALVGPT GSGKTTVMNL MNRFYDVNGG
AIKFDGTDIR EFDLDSLRSN VGIVLQESVL FDGTIADNIK FGKPNATQEE IETVAKTTHI
HEFIESLPDK YETHVSDDES VFSVGQKQQI SIARTILTNP ELLILDEATS NVDTVTEEQI
QWAMEAAIAG RTSFVIAHRL KTILNADKIV VLKDGEVIEE GNHHELVAQG GFYSELYHNQ
FVFE