| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_0301 |
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| Symbol | |
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| ID | 4433238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | - |
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| Start bp | 278489 |
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| End bp | 279685 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639666097 |
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| Product | integrase |
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| Protein accession | YP_808331 |
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| Protein GI | 116511115 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAC TAAATATAAA AGAATACAAA ACAAAAAGCG GAGAAGTACG CTATATTCTC
CGTGGCGCTT ATATAGGTAC TGATGTGCTG ACAGGTAAGC AAGTGCGAAC TGATGTAAGA
GGACGCACAA AAAAAGACGT TAAAACTAAA CTTCAACGTC TACAGAATGA TTTTATTAAA
AATGGATGCA TGAAAAAAGA AAAGCAGCTA AAGACTTTTG CTGAGGTTGC TGAATCGTGG
TTTGATATGT ATCAGCATAC AGTCAAAAGC CATTCAATAG AGATAATGCG ATCCAATCTA
AACAGATATA TCTTGCCAGC TTTTGGCAAT ACTAAAATTG ATAGACTGAC AACTTCTCAA
ATTCAGCTAC AAGTCAATCG CTGGGCTAAA AATGCAGGTC AACCACTTAA TGGAGCGATG
AGAAGAAATA AAGGGAATGC CAAAGGGTAC AAACTTCTTC TTAATGTAAC TAATAGAATA
TTTAAATATG CGATTTCTAT GGGGCTAGTA AGCTCTAACC CATGCCTAAC TGTCATTGTC
CCTAATGTTA AAATGGAAAC CACTGAACGT GAAGTAAAGC ATTTCAACAA AGAACAACTA
CAGTCTTATT TTGATTATAT GGAGAGTTTG CCAAATACTT GGGTAAATAA TGAGCTAAGA
GCCATTTGTC GTTTACTGAC TGCTTCTGGT TTGCGGATTG GCGAGGCCAC TGCCTTATCA
TGGTCTGATA TTGACTTCGA AAAGCAGACA ATTTCTGTCA GTAAAACTAC TACTGGACAT
CAAACAATAC AAGATACACC GAAAACAAAG CATAGCAAGC GAGTAGTTAT CATTGACAGC
AAAACAATAT CACACTTGCA ACGTTGGCAT TTATATCAAA AGTCATACTT TTTAAAGCTT
GGCCAACCTA ATCAATCACT TATTTTTCCT ACAAATCAAG GTAAAATACT CGACTATCAA
CGGCTTAGAA AATCACTACA GGCTACTTTT AAAGCTACTG AACTTCATGA TATTGGATTT
CATGGCTTTC GGCATTCTCA TGCATCATTA TTATTGAATG CTGGAGTATC ATATAAGGAA
ATTCAAACAA GATTAGGACA TGCAAGTATA AAAATGACTA TGGATATTTA TAGCCATCTG
GAAAAAGAAA AGGAATCTGA GGCTGTAGAA CTTTTCGCAA AATATGCTAA TTTTTAG
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| Protein sequence | MNKLNIKEYK TKSGEVRYIL RGAYIGTDVL TGKQVRTDVR GRTKKDVKTK LQRLQNDFIK
NGCMKKEKQL KTFAEVAESW FDMYQHTVKS HSIEIMRSNL NRYILPAFGN TKIDRLTTSQ
IQLQVNRWAK NAGQPLNGAM RRNKGNAKGY KLLLNVTNRI FKYAISMGLV SSNPCLTVIV
PNVKMETTER EVKHFNKEQL QSYFDYMESL PNTWVNNELR AICRLLTASG LRIGEATALS
WSDIDFEKQT ISVSKTTTGH QTIQDTPKTK HSKRVVIIDS KTISHLQRWH LYQKSYFLKL
GQPNQSLIFP TNQGKILDYQ RLRKSLQATF KATELHDIGF HGFRHSHASL LLNAGVSYKE
IQTRLGHASI KMTMDIYSHL EKEKESEAVE LFAKYANF
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