| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_0292 |
|---|
| Symbol | |
|---|
| ID | 4433229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | + |
|---|
| Start bp | 270708 |
|---|
| End bp | 272012 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639666088 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_808324 |
|---|
| Protein GI | 116511108 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00413621 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAA TAAAAAACCG CAGAAATTTT ATTCTCATCA GCCTTATCGC CCTTTTTTGG
CTGACATTTA GCCTTGCACT GCCTTTTCGC CTTGTCGGCG ATGACCCGCA TTATTTCACA
GCCTTACATG ATTTTCATGG AAATCTGATT TCGTATCTTG TCAACGATTA TAAAACTTGG
TCATCACGAA TGATTGGCGA CGGACTAAAT GTCCTTCTGG TTCATCATGT CAGACTTTGG
CAAATCCTTG AAGCGCTTGC TTTTACGATA ATTTCTGTCT TACCAGCTTA CTTTTTCAAA
AACTCATCTA AAAATTGCGC AAAATTTCTT TTGATTTCAT TTACTTTATC TTTTCTTTTT
CCCATCGGTC TGATTTATCG CGCGGGTTAC GTAGCTACAA CTGTTCACTA TCTCTTTCCT
TTCGCCTGCC TCCTTTTAGC GATTTTTCCT TTTATTCAAA GGCTTAATGA AAAGAAAAAC
CCAATTTTTC TATGGATAAT TAGTTTTCTA GCATTTATTT ATGCCATTTT AGAGCAACAA
ACCCTCGTAA TCTTAGGAAT TTTCCTCACT TCACTTATTA TTTATCTATT TATTGAAAAA
AAGTGGATTC GTTTACCTCT CACTTACCTT GTTTTTGCAT TCCTTTCCCT TATTTTCAGT
CTCACTGCCC CGGGAAATCA TTTGCGGACA ATCAGCGAAA CAAAAGCATA TTTTCCAAAT
TTTGGTCAAC TTTCCCTCTT TACCAAAGCT AATATGGGAT TTGCTTCACT CACATCATCT
CTCTTCACAA ATACTTATTT GCTCCCTCTT ATTTTCTTGC TGACAGTCTT TGTTTTACTC
ATTAAACAAG GAAAAATTTG TAAATCACTG ATTATTTTAC CGCCAATTAT CTTTAGTGTG
ATTATTGGTT TTGACGCGTC CAGCTTACAA GATCTTATCG TCTCAAAGTT AGACTTAGCA
ACAAATGCAG GAACTCTGAC TCGCCTACTT CTTACTTTTC TCAATATGAA TAAAGTCAAT
AATACAGGCA ATCCTGTGAT GACCAGTAGT TTAGCAGATA TCCTATTTTT ACTCCTCATC
ATCTGCCTAT TTTTAGCGAT TTATTGGCTT TTCAATAGTA ATTTCAAGAA ATCTTTACTT
TCTTTTCTTG TCCTATTGAC AGGATTTTTA AGCAGATTTA TGATGGGATT TTTCCCTTCA
GTCTGGATGT CAGGCGCACG AACAGCAACA TTTTTACTCT ATAGTTTTAT GTTTGCACTC
CTTATCATCC TTTATCAACT CAACGAGAGC AAAAACCTCG AATAG
|
|---|
| Protein sequence | MKIIKNRRNF ILISLIALFW LTFSLALPFR LVGDDPHYFT ALHDFHGNLI SYLVNDYKTW
SSRMIGDGLN VLLVHHVRLW QILEALAFTI ISVLPAYFFK NSSKNCAKFL LISFTLSFLF
PIGLIYRAGY VATTVHYLFP FACLLLAIFP FIQRLNEKKN PIFLWIISFL AFIYAILEQQ
TLVILGIFLT SLIIYLFIEK KWIRLPLTYL VFAFLSLIFS LTAPGNHLRT ISETKAYFPN
FGQLSLFTKA NMGFASLTSS LFTNTYLLPL IFLLTVFVLL IKQGKICKSL IILPPIIFSV
IIGFDASSLQ DLIVSKLDLA TNAGTLTRLL LTFLNMNKVN NTGNPVMTSS LADILFLLLI
ICLFLAIYWL FNSNFKKSLL SFLVLLTGFL SRFMMGFFPS VWMSGARTAT FLLYSFMFAL
LIILYQLNES KNLE
|
|---|
| |