Gene LACR_0266 details

Gene Information

• Locus tag: LACR_0266
• ID: 4433299
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactococcus lactis subsp. cremoris SK11
• Kingdom: Bacteria
• Replicon accession: NC_008527
• Strand: +
• Start bp: 247742
• End bp: 249640
• Gene Length: 1899 bp
• Protein Length: 632 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 639666063
• Product: ABC-type multidrug transport system, ATPase and permease component
• Protein accession: YP_808300
• Protein GI: 116511084
• COG category: [V] Defense mechanisms
• COG ID: [COG1132] ABC-type multidrug transport system, ATPase and permease components

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.358191
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGAGAG GAAATTATCT TAATCGTGGG GGGAAGGGAG CTGACCGTTT CCAAAAAGGA 
CGGCGAGCTG AAAATTTCTT TCCGACCATT ATTCGTCTTT TTAAATATAT GCGTCGCGAT 
TTGTGGGGGT TGATATTTTC AATGGTAATT GCTGGTCTGT CAGTCATCTT ATCAGTTCAA 
GCCCCTAAAA TCTTAGGGAC GGCGACAACG GTGATTTTTG ATGGAGTGAC AAAAAGTCTA 
AAAAATCATC AAGCTATTCG AATTGACATG GCAAAAGTTG AATCTATTTT GCTTTATGTC 
TTGGTCATTT ATCTAATTTC ATTTGTTTCT GGAGTCTTGC AACAAAGCAT CATGACTCGA 
ATTTCACAGC GAACGGTTTA TACTTTGCGC CGCGAATTTA AAAATAAAAT GAAAAAGTTG 
CCCATTTCTT ATTATGATAG TCATAATAAT GACGATATCA TGAGTCGAAT GATTAATGAT 
ATGGACAATA TTTCGGGGAC TTTAAACCAA ACATTGATTC AACTGATTAC AAGTATCCTG 
CAATTTGTAG GAACCATCTA CTTCATGCTG ACGATTTCTT GGCAGTTGGC ATTAGTTGCC 
TTTATCACAG TTCCTTTAGT AATGATTACT GTCAGAATTG TCGCTCCTTT ATCGCAAAAA 
TTCTTTTCTG AACAACAAAA GAATTTGGGC TTATTAAATG ATCAAATTGA GGAAAATTAC 
TCAGGGCACA CGGTCATTAA AACTTTTAAT CATGAAGCAG CAGCTGAAAA AGAATTTGCT 
AGAAGAAATG ATGATTTTTA TAAATCCGCA TGGAAAGCAC AATTTGTGTC TACTTTGATT 
TACCCAACCA TGCGTTTTAT CAATAATTTG GATTATTTAG CCATGGCAGT GATTGGTGGG 
CTTAAAGTGA TTTCAGGGTC AGTCAATCTC GGAGATGTTC AAGCCATGTT GCAATATACC 
AATCAATTTG CGCAACCCAT TACGAATATT TCTAACATGC TTAATACCAT TCAAGAAACA 
GTCGCATCGG CTGAGCGTAT TTTTGAAGTA TTAGATGAAA AAGAAATGAC TGAGGGGATA 
ACGGACATTG AAAAAGTTAC TGACAGCAAG AAAAAAAGGA CTGACGAAAG ACCCAGAAAT 
TCTGTCAGTA ACTTTGAAAC TGCTGAAAGG ACTGATTTTA TTCATTTTGA ACAAGTGGCA 
TTTTCTTACA ATGAAAATCA AACACTCATG ACAGATGTTA ATTTTTCAGT TGAAGTCGGT 
CAGATGGTTG CCATTGTCGG ACCAACCGGT GCTGGGAAAA CAACTATGAT TAATTTGCTA 
GAACGTTTTT ACGATGTGAG CTCAGGGAAG ATTTTACTTG AAGGTAAAGA CATTCGGGAA 
ACAAAACGAG AACAATTGCG AAGTCGAATG GCAATGGTCT TGCAAGAAAC ATGGCTATTT 
TCAGGAACAA TCATGGATAA TTTGCGTTAT GGACGTCTTG AATCAACAGA TGATGAAGTG 
ATTCAGGCCG CTAAAATGGC CCATGCTGAT GAGTTTATCA CGACTTTACC TCAAGGTTAT 
CAAACCGTCT TAAATGAAAC GGCTACAAAT ATTTCTCAGG GACAAAGACA GCTGTTAACC 
ATTGCGCGTG CTTTTGTGGC AAAGCCCGAG ATATTAATTC TGGACGAGGC AACCTCTAGC 
GTAGATACAA GGACTGAGCG CTTGATTCAA TCGGCAATGA ATCGTTTGCT CAAAGGGCGG 
ACAAGTTTTG TTGTGGCGCA CCGTTTATCG ACCATTCGTG ATGCTAATCA GATTTTGGTC 
ATGGACAAGG GAAATATTGT AGAAACAGGC AATCATGAAA GTCTACTAAA ACAAGAAGGA 
CTTTATGCAA GTTTGTACAA TTCACAATTT GCAAAATAA 

 

Protein sequence

MMRGNYLNRG GKGADRFQKG RRAENFFPTI IRLFKYMRRD LWGLIFSMVI AGLSVILSVQ 
APKILGTATT VIFDGVTKSL KNHQAIRIDM AKVESILLYV LVIYLISFVS GVLQQSIMTR 
ISQRTVYTLR REFKNKMKKL PISYYDSHNN DDIMSRMIND MDNISGTLNQ TLIQLITSIL 
QFVGTIYFML TISWQLALVA FITVPLVMIT VRIVAPLSQK FFSEQQKNLG LLNDQIEENY 
SGHTVIKTFN HEAAAEKEFA RRNDDFYKSA WKAQFVSTLI YPTMRFINNL DYLAMAVIGG 
LKVISGSVNL GDVQAMLQYT NQFAQPITNI SNMLNTIQET VASAERIFEV LDEKEMTEGI 
TDIEKVTDSK KKRTDERPRN SVSNFETAER TDFIHFEQVA FSYNENQTLM TDVNFSVEVG 
QMVAIVGPTG AGKTTMINLL ERFYDVSSGK ILLEGKDIRE TKREQLRSRM AMVLQETWLF 
SGTIMDNLRY GRLESTDDEV IQAAKMAHAD EFITTLPQGY QTVLNETATN ISQGQRQLLT 
IARAFVAKPE ILILDEATSS VDTRTERLIQ SAMNRLLKGR TSFVVAHRLS TIRDANQILV 
MDKGNIVETG NHESLLKQEG LYASLYNSQF AK