Gene LACR_0255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0255 
Symbol 
ID4433288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp235214 
End bp235930 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content42% 
IMG OID639666054 
Productglycerol uptake facilitator related permease (major Intrinsic protein family) 
Protein accessionYP_808292 
Protein GI116511076 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) 
TIGRFAM ID[TIGR00861] MIP family channel proteins 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATTAC AAATATTGGG AGAATTTCTG GGCACTTTCA TCCTTGTATT ATTAGGAAAT 
GGGGTTGTCG CAGCAAATGT TTTAGGTAAA ACAAAATCGG AAAATGCAGG TTGGGTGACT
ATCGCAATTG GCTGGGGCTT AGCCGTTGCT GTCGCCGTCT GGGTAGTTGG CTTCTTTTCG
CCCGCTTATC TCAATCCAGC CCTGGTCATT GGTTTTCTTG TCTTAGGGAA AATAAAGATT
GGCTTAGCAC TTGCTTTTAT TGTAGCTGAA TTTTTAGGTG CTATGTTAGG TGCTGTCGCC
GTTTGGTTAC ATTATTATCC TCATTGGGAA GAAACAAAAG ATTCTTCTCT AATCTTGGCA
AGTTTTGCCA CAGCACCTGC TATTCGTCAT TCTTGGTCCA ATTTTTTAGG AGAAGCTTTT
GACGGGGCGC TGCTCATGCT ATTGATTATG GCAATGGGAC ATTATCGTCT TGAAGGTGGT
TTTGGTACAA TTATTATCGG TTTTCTCATT ATGGCAGTTG GTTTTTCTTT AGGACCAACT
ACTGGTTACG CGATGAATCC AGCACGTGAC TTAGGTCCGA GAATAATGCA CGCACTTTTA
CCAATCAAAA ATAAAGGAAC TTCTGACTGG GGCTATGCTT GGATTCCAGC AACTGGTTCG
ATTGTTGGTG CTGTAATTGC TGGACTACTC TATCAATGGA TGCTGACGCT TCATTGA
 
Protein sequence
MTLQILGEFL GTFILVLLGN GVVAANVLGK TKSENAGWVT IAIGWGLAVA VAVWVVGFFS 
PAYLNPALVI GFLVLGKIKI GLALAFIVAE FLGAMLGAVA VWLHYYPHWE ETKDSSLILA
SFATAPAIRH SWSNFLGEAF DGALLMLLIM AMGHYRLEGG FGTIIIGFLI MAVGFSLGPT
TGYAMNPARD LGPRIMHALL PIKNKGTSDW GYAWIPATGS IVGAVIAGLL YQWMLTLH