Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0244 |
Symbol | |
ID | 4433794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 226179 |
End bp | 227600 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639666046 |
Product | major facilitator superfamily permease |
Protein accession | YP_808284 |
Protein GI | 116511068 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00531035 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTTTCCA ATGTCATGGC AGGTTTGGAA GGCTCAATTG TGGCTACTGC TCTGCCAGCA ATGATGGCAG AATTACACGG CATCAAGTTG ATGAGTTGGG TTGTAACTAT TTATATGCTC CTCATGGCTG TTTCTTCTCC CATTTGGACA AAACTGGCCG AACGTTTTGG TTATAAACAA ATGTTTGTGC TCGGCACGCT TTTATTTACC ATCGGCTCTC TCGGCGAGGG ATTGGCCGTC AATATGTTGA TGGTCATTGT CGCCCGCGCC CTCATGGGGC TTGGTGCTGG TGTGATGATT CAACTTCCTT TTGTCATCTA TGGAATGATG TATCAGGCTG ATGAGCGGAG ACGCGTGATT GGAAATACTG TCGCTGCTTA TTCATTTTCA ACTATTGCAG GACCAATTGT CGGAGGTTTG ATTGTAACCT TACTTGACTG GCGCTGGGTC TTTTTCATCA ATATTCCGAT TGGGATTTAC ATGGCTTTTA TTGTTTGGAA AAATTTCGAT CTTAAAACTG ACCATACTAA AAAATCAATT GATTTTGCTG GTTCTGCTTC TCTATCCATT GCCGTCATTG CCATTATGCT TCTTTTTCAA ATGATGGGGA ATGCGGTCAT TAATCTTCCT TTGTTGATTG CTTTATTAGT CATCAGTTTG CTCTTTTTCA CTGGATTTTA TTTTGCTGAA AAAAGAGCGG TTGACCCCAT TGTTCCGCTT GAACTTTTCA AAAACCCTTC ATTTATCGCT AAAAATGTCA TGTTTTTCAT GCAATATGGT TTCTTTGGTT TTTATACAAA CTATCTGCCC ACTTGGGGGC AAGGCGTCAT GGGCGCAACG GCATTAGTCG GTGGAATGGT TTTGATTCCA TCAGCAATCA TGCTAGTTAT CGGAACGAGA AATGTCAATC ATCTCATTCA AAAAGTCGGC GAAAAAAGAA CGATTTATAT CGGTTTTGCT ATCATGGTTT TAGGTGCACT TTTCTTATTT AGTTTGCCTG AACATGCCTC AATTCTTATG CTCTTTGTGG CAACAGCAAT TCTTGGCACC GCCTTTGGGA TTGTCAACAT TACCTTGCAG GTTGCAGTTC AAGAAAGTGT CGCTAAGCAT TTGATTGGTG CAGCGACTGC CGTTAATGCT TTACTAAGAA CAATGGGAAC AACACTTGTC TTATCTGGCT TATCAATCGC TCTCAACCGT ACATTTACTG ACTCAACTGC ACATAATCCA AAACTTACGA CGACACTTCT TAATCAAATT TCTGATGCTC AAGCTTTAAA AAATATTCCA ACTGCACTCG TTGCCCCTTT GCGTCACACC TTATTTAATG GTATGCACTT GCTTGCGCTT ATCTCCGGCT TACTTCTTTT CATTGCGCTT TTTGTCAATT GGCTCGACCC TTGGAAAAAA GGACTAGAAT AA
|
Protein sequence | MLSNVMAGLE GSIVATALPA MMAELHGIKL MSWVVTIYML LMAVSSPIWT KLAERFGYKQ MFVLGTLLFT IGSLGEGLAV NMLMVIVARA LMGLGAGVMI QLPFVIYGMM YQADERRRVI GNTVAAYSFS TIAGPIVGGL IVTLLDWRWV FFINIPIGIY MAFIVWKNFD LKTDHTKKSI DFAGSASLSI AVIAIMLLFQ MMGNAVINLP LLIALLVISL LFFTGFYFAE KRAVDPIVPL ELFKNPSFIA KNVMFFMQYG FFGFYTNYLP TWGQGVMGAT ALVGGMVLIP SAIMLVIGTR NVNHLIQKVG EKRTIYIGFA IMVLGALFLF SLPEHASILM LFVATAILGT AFGIVNITLQ VAVQESVAKH LIGAATAVNA LLRTMGTTLV LSGLSIALNR TFTDSTAHNP KLTTTLLNQI SDAQALKNIP TALVAPLRHT LFNGMHLLAL ISGLLLFIAL FVNWLDPWKK GLE
|
| |