| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_0228 |
|---|
| Symbol | |
|---|
| ID | 4434381 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | + |
|---|
| Start bp | 213881 |
|---|
| End bp | 215125 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 639666030 |
|---|
| Product | GTPase |
|---|
| Protein accession | YP_808268 |
|---|
| Protein GI | 116511052 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2262] GTPases |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR03156] GTP-binding protein HflX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATAGATT TAGAAGAAAA ACAAGAAAGA GTACTCCTTG CGGGAGTAGA AACAGCCCAA
AATTTTCAGG CTTTTGAGTC ATCAATGGTT GAACTGGCTG AATTGACAAA AACGGCTGGC
GGATTGGTCA TTGACCAATT TACTCAAAAA AGAGAACGTC CAGATAGTCG GACAATGATT
GGTTCTGGAA AATTGGAACA AATGCGTTGG GCGATTGAAG TGGGCGAAAT TGATACGGTT
ATTTTTAATG ACCGTCTATC CCCAAGACAA AATGTTAATT TGGAAGAAGC TTTGGGCGTC
AAAGTTATTG ATAGAATGCA ATTAATTTTG GATATTTTTG CTATGCGTGC GCGCTCGCAT
GAAGGAATGC TTCAAGTTGA AGAAGCCCAG CTCAATTATC TTTTACCGCG TTTGGTCGGG
CAAGGAATTA TGCTCAGCCG TCAAGGTGGG GGAATTGGTT CTAAAGGGCC AGGTGAAACC
AAGCTTGAAA CAGATCGACG TTATATTCGC ACTCGAATTG AAAATATTGA TAAAGCCCTC
AAAAAAGTTG AAAAAACAAG GGAAAATATT CGCCAAAAAC GCTCGAAATC AGGAATTTTT
CGGATTGGTT TAATTGGTTA CACCAATGCC GGAAAATCCA GCATTATGAA TGCTTTAGTT
GGTCTTGATA AAGAACAATA TGAGCAAAAT GAACTTTTTG CGACATTGGA CGCCACAACA
AAAGCCGTTC AATTGGTTGA AGATTTTATG GTGTCACTGA CAGATACTGT CGGTTTTATC
CAAAATCTGC CAACAGAGCT GATTAAAGCT TTTAAATCAA CCTTAGAAGA ATCTGCAAAT
GTTGATTTAC TGATTCATGT CATTGATGCC AGTAATCCTC ATCATGAAAT TCATGAACAA
ACGGTCTTGA AAATCATGGA AGATTTGAAG CTGACAAATA TTCCTGTGCT GAATGTTTAT
AATAAAATGG ATATTGCCCC AAGTGACTTC TTGCCAACTT TGTCGCCAAG TTTACAACTC
TCAATTAAAT CTGAAAGTGG CGTTCAATGG CTGAAAACAG CAATTTTAGA AAAATTGCAT
GAGCTTTTTG AAGCTTTTGA GATAGAACTC CCTTATGAAA AAGCTTATCA GTTGCCTGAA
TTAAGAAAGA GTGCCTTGGT TCAATTGGTG GTTGAGGGCG AAAATGCTTA TCAGATTAAG
GGACTGATTG CGCCTGAGTT GAGTTGGAAA TTGAATGAGT TTTAG
|
|---|
| Protein sequence | MIDLEEKQER VLLAGVETAQ NFQAFESSMV ELAELTKTAG GLVIDQFTQK RERPDSRTMI
GSGKLEQMRW AIEVGEIDTV IFNDRLSPRQ NVNLEEALGV KVIDRMQLIL DIFAMRARSH
EGMLQVEEAQ LNYLLPRLVG QGIMLSRQGG GIGSKGPGET KLETDRRYIR TRIENIDKAL
KKVEKTRENI RQKRSKSGIF RIGLIGYTNA GKSSIMNALV GLDKEQYEQN ELFATLDATT
KAVQLVEDFM VSLTDTVGFI QNLPTELIKA FKSTLEESAN VDLLIHVIDA SNPHHEIHEQ
TVLKIMEDLK LTNIPVLNVY NKMDIAPSDF LPTLSPSLQL SIKSESGVQW LKTAILEKLH
ELFEAFEIEL PYEKAYQLPE LRKSALVQLV VEGENAYQIK GLIAPELSWK LNEF
|
|---|
| |