Gene LACR_0205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0205 
Symbol 
ID4434532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand+ 
Start bp187710 
End bp188651 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content39% 
IMG OID639666007 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_808245 
Protein GI116511029 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT CTGTCAGTAA AAAATTAAAG ATTGGAGAAC AAATGATTTT AATAACAGGT 
GGAAATGGAC AACTTGGAAC AGAGTTGCGT CATTTACTTG ATGAACGTGG CATAGCTTAT 
ACAGCAACAG ATGCTAAAGA ACTCGATATT ACTGACGGCG TCGCTGTTGA TAAATTCTTT 
GATGAAAATA AACCTGAACT TGTCTATCAT TGTGCGGCTT ATACAGCTGT TGATAAAGCT 
GAAGACGAAG GTCGTGAACT TGATGAAAAA ATCAATGTTG ATGGAACTAA AAATGTAGCC 
GAAGCGGCAG CACGTGTTGG GGCAACACTT GTTTATATTT CAACTGACTA TGTTTTTGGC 
GGAACTTTGC CAATTGGCCA AGAGTGGCCG GTTGATGCAC CAAAAGCTCC TGAATCTGAA 
TATGGACGGA CGAAACATCT TGGTGAAGAA GCAGTTGTGG CTTCTGGCGT AAAATATTAC 
ATCATCCGTA CTGCTTGGGT TTTTGGTTCT TATGGACCAA ACTTTGTCTT CACAATGCAA 
AACTTGGCGA CACGTTTTCC AGAATTAACC GTTGTTAATG ATCAACACGG CAGACCAACT 
TGGACACGTA CACTTGCTGA ATTTATGGTT TATTTAGTTA GTGAAAAAGC TGATTTTGGT 
TTTTATCATC TAACAAACGA TGCTGCGTCT GGTGAAGATG TGACTTGGTT TGATTTTGCT 
AAAGAAATCT TGAAAGACAC AGATGTGCTT GTTAAACCTG TGGATTCAAG CAAATTCCCG 
GCAAAAGCAA AACGTCCATT TAATTCAACA ATGAGTCTTG AAAAAGCAAA AGCGACAGGT 
TTTGTCATTC CAACATGGCA AGAAGCTTTA GCAAGTATGC TTGAAAAAGG CGATTTGCGT 
GAAAATAAAG ATGGCGTAAA AGGCGAAATT AACAAAAAAT AA
 
Protein sequence
MKKSVSKKLK IGEQMILITG GNGQLGTELR HLLDERGIAY TATDAKELDI TDGVAVDKFF 
DENKPELVYH CAAYTAVDKA EDEGRELDEK INVDGTKNVA EAAARVGATL VYISTDYVFG 
GTLPIGQEWP VDAPKAPESE YGRTKHLGEE AVVASGVKYY IIRTAWVFGS YGPNFVFTMQ 
NLATRFPELT VVNDQHGRPT WTRTLAEFMV YLVSEKADFG FYHLTNDAAS GEDVTWFDFA 
KEILKDTDVL VKPVDSSKFP AKAKRPFNST MSLEKAKATG FVIPTWQEAL ASMLEKGDLR 
ENKDGVKGEI NKK